Mycosarcoma maydis: UMAG_03765
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Entry
UMAG_03765 CDS
T01021
Name
(RefSeq) putative ATP-dependent RNA helicase DBP5
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
uma
Mycosarcoma maydis
Pathway
uma03013
Nucleocytoplasmic transport
uma03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
uma00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
UMAG_03765
03015 mRNA surveillance pathway
UMAG_03765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uma03019
]
UMAG_03765
Enzymes [BR:
uma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
UMAG_03765
Messenger RNA biogenesis [BR:
uma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
UMAG_03765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
AAA_30
Arginosuc_synth
Motif
Other DBs
NCBI-GeneID:
23564133
NCBI-ProteinID:
XP_011390218
UniProt:
Q4P7Z8
LinkDB
All DBs
Position
10:complement(366464..367834)
Genome browser
AA seq
456 aa
AA seq
DB search
MSESKDKTTAPAADSNVNEIASGISGLLSSKDVAESNLRESSHEVQVTLADQQADPNSPL
YSAKSFEALGLHENLLKGIYAMKYQKPSKIQEKALPLLLQNPPKNMIGQSQSGTGKTAAF
ILTMLSRIDYDLQKPQAIALAPSRELARQIMDVARTMSKFTNVTTCLCLPDEVKRGEKIT
AQLIIGTPGKTFDMIKSKGIDTAAIKVFVLDEADNMLDQQSLGEQSIRVKNTMPKSCQLV
LFSATFPTNVYDFAVRIAPGANEIRLKQEELSVEGIKQFYMDCKDEDHKYEVLVELYNLL
TIGQSIIFCAKRETADRIAQKMTQEGHKVDSLHGRLETADRDRTIDAFRDGKSKVLISTN
VIARGIDIQQVTLVINYDMPLTQTGEADAETYLHRIGRTGRFGRKGVSINFVHDQQSWSY
MDQIEKALKCQITRVATNDLEEMEYTIKEALKQIGK
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaagcaaagacaagaccacggcaccagccgccgacagcaacgtcaacgagatt
gcgtcgggcatctctggactcttgtctagcaaggatgttgccgagtcgaatctgcgcgag
tcatcgcacgaggttcaggtgacactcgccgatcagcaggcggatccgaattctcccttg
tactcggccaagagcttcgaagcgcttggcttgcacgagaatctactcaagggcatctac
gccatgaagtatcagaagccgtccaagatccaagaaaaggcactgccgctgctcctccag
aacccaccgaaaaacatgatcggccagtcgcaatcaggaaccggaaaaacggccgccttc
atccttaccatgctctcgcgcatcgactatgacctccaaaagccacaagccattgcattg
gcgccatcgcgagagctggctcgtcagatcatggacgtggcacgcaccatgtccaagttt
accaatgtaaccacgtgcctctgcttgccagacgaggtgaagcgtggcgaaaagatcacg
gcgcagctcatcattggtacaccaggcaagacattcgacatgatcaagagcaagggtata
gatacggccgccattaaggtattcgtgctcgacgaggccgacaacatgctcgaccagcag
tcactgggtgaacagtcaatccgtgtcaagaacacgatgcccaagtcatgtcagctggta
ctgttctcggccacgttccctaccaacgtgtacgactttgcggtccgcatcgcaccggga
gccaacgagatccgactcaagcaggaagagctgtcggtagaaggcatcaaacagttctac
atggactgcaaggatgaagaccacaagtacgaagtgcttgtggaactgtacaacctgctc
accatcggacagagcatcatcttctgcgccaagcgcgaaaccgccgaccgcatcgcgcaa
aagatgacgcaggagggacacaaggtcgactcgctccacggtcgactcgagacggccgac
cgagaccgcaccatcgatgcgttccgcgatggcaagagcaaggtgctcatctcgaccaac
gtcattgcacgtggtattgacattcagcaggtgacgctggtgatcaactacgatatgccg
ctgacgcagacgggcgaagcagacgccgagacgtatctgcaccgtatcggacggacgggt
cgattcggtcgcaagggtgtctcgatcaactttgtgcacgaccagcagagttggtcgtac
atggaccagatcgaaaaggcgctcaagtgccagatcacccgtgtcgcaaccaacgacctc
gaggagatggaatacacgatcaaggaagcgctcaagcagattggcaaatga
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