Mycosarcoma maydis: UMAG_03892
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Entry
UMAG_03892 CDS
T01021
Name
(RefSeq) putative ATP dependent DEAD-box family RNA helicase
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
uma
Mycosarcoma maydis
Brite
KEGG Orthology (KO) [BR:
uma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
uma03009
]
UMAG_03892
Enzymes [BR:
uma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
UMAG_03892
Ribosome biogenesis [BR:
uma03009
]
Eukaryotic type
Pre-60S particles
Helicases
UMAG_03892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CDC45
Motif
Other DBs
NCBI-GeneID:
23564226
NCBI-ProteinID:
XP_011390378
UniProt:
Q4P7M1
LinkDB
All DBs
Position
11:complement(69749..71809)
Genome browser
AA seq
686 aa
AA seq
DB search
MSEPSSSKVKADSLLPPAKSTTAATAARSANGSTNTGASQLTKHGIELPSQEDAERLGFN
VFSHILDPRLLRALADLGYGIPTPIQQKAIPLALAGKDILARARTGSGKTLAYGLPLLQK
VLDAKSAVAKSDANHQLTRALVLVPTRELAEQVFRHLSVVIEYVRDDIRLVNVAREASEK
VQRLLLSEKPDVVIATPSKALNYLQNASLDLKSGMESLAIDEADLILSYGHDADVKSLLG
ANFLPSHFQSFLMSATMTSDVSKLKGLLLRNPVVLKLNHDDEAASGSNLVQFYTKTTEED
KFLLAYVILKLKLIRGKAILFVNELERGYRLKLFLEKFGLRACVLNAELPINSRYSIVEE
FNKGKFDYIVATDEPTGASGNMQDDEGDDEEEDADEREADEVDEQAEDQREAGKKRKSSE
HAGAETKSNKSKVSQHRKGKNGASEYGVSRGVDFINVSCVINFDLPTSVDSYIHRVGRTA
RGGASGTALSFVVPSDQVGRSKYLYCASTTRDESVFKMLNKPSTISLLGSALQEWKYDSS
SVAGFHYRVTDTLKSITKALIREARIKELKNEILTSSKLQSHFEDHPDDLAFLQHDKALL
TSRAQQSHLKHVPQYLVPKIINPGAKLTKSSGSEYKGYVPKNKIKDGANDRKNKGGKRRS
STGKNTTGAAGKSRKKVDPLRKFSNK
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagccatcgtcgtccaaggtcaaggcagactcgctgcttccacctgccaagtct
accactgcagctacagcagcaaggtctgctaacggatcgaccaacactggcgcatcgcaa
ttaacaaagcacggcatcgagcttccttcgcaagaagatgcggaacgactcggattcaac
gtcttctcccacattctcgatccacgcctgctgcgtgcgctcgcagatttaggatatggt
atcccaactccgattcaacagaaagcgattccactggctcttgcaggcaaggacattctc
gccagagcacgcacaggatcgggcaagacgcttgcctatggtctacctctgctccaaaag
gtgctcgatgcaaagagcgccgtggccaagtcagatgccaaccaccagctcacccgtgcg
ttggtgctggtgccaactcgtgagctcgcagagcaagtgtttcgacatctctctgtggtt
atcgagtacgtccgtgatgacattcgactcgtcaatgtcgccagagaggcgtccgagaaa
gtgcagcgtcttttgcttagcgaaaaacctgatgtggtcattgcaacaccatccaaagcg
ctcaactatctgcaaaatgcatcgctcgacctcaagtccggtatggaatcgctcgcgatc
gacgaagccgacctgatcctttcgtatggccacgatgcagacgtcaaatcgttgctcgga
gctaacttcctgccaagccacttccagtctttcctcatgtcagcgacaatgacttcggac
gtgtcaaagctcaaaggtctgctcctcaggaacccagtcgtgctgaagctcaatcacgac
gatgaggcagcttcaggctcgaatctggttcaattctatacaaagacgactgaagaggac
aagtttctgcttgcttatgtcatcttgaagctcaagctgattcgaggcaaggcgatcctg
tttgtcaacgagctggagaggggttacagactaaagctgttcctggaaaagttcggattg
cgcgcctgcgtgctcaatgccgagttgccgatcaactcgagatacagcatcgtggaagag
ttcaacaaaggaaagtttgactatatcgttgccactgacgagccgacgggtgcaagtggt
aatatgcaggatgacgagggagacgatgaagaggaggacgcagacgagcgagaggcagac
gaggttgatgagcaagccgaggaccaacgcgaagcgggcaagaaacgtaaatcctctgag
catgctggagcggaaacaaagagcaacaagtccaaggtatcacagcaccgcaaaggcaag
aacggcgcttccgagtacggcgtctctcgtggtgtcgatttcatcaacgtttcctgcgtt
atcaactttgaccttccgacgagcgtggactcgtacattcaccgagtagggcgtacagca
cgaggtggagcttcgggtacagcgctctctttcgtggtgccctcggaccaagtgggccgt
tcgaagtacctgtattgtgccagtacaacacgcgacgagtcggtgttcaaaatgctcaac
aagccttccacgatctcgctgcttggcagcgcacttcaagagtggaagtacgactcttcg
tcagtcgcgggcttccactaccgtgtcaccgacactctgaagagcatcaccaaggcgctt
atccgagaagcacgcatcaaagagctcaaaaacgagatcctgacttcgtcgaaactccag
tcgcatttcgaagatcatcccgacgatctggcgttcttgcaacacgacaaggctctgctt
acaagccgtgctcaacagagtcacctcaaacacgtaccgcagtacctggtaccaaagatt
attaatcccggtgccaagttaacaaagagctcgggtagcgagtacaagggttacgttccc
aagaacaagatcaaagacggtgcgaatgataggaagaacaagggcggcaagcgtaggagc
tcgactggtaagaacaccacaggcgcagctggcaagtcgaggaagaaggtggatccgttg
aggaaattttccaacaagtag
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