Mycosarcoma maydis: UMAG_04446
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Entry
UMAG_04446 CDS
T01021
Name
(RefSeq) hypothetical protein
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
uma
Mycosarcoma maydis
Pathway
uma03018
RNA degradation
uma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
uma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
UMAG_04446
09123 Folding, sorting and degradation
03018 RNA degradation
UMAG_04446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uma03019
]
UMAG_04446
03041 Spliceosome [BR:
uma03041
]
UMAG_04446
Messenger RNA biogenesis [BR:
uma03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
UMAG_04446
mRNA degradation factors
5'-3' decay
Lsm complex
UMAG_04446
Spliceosome [BR:
uma03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
UMAG_04446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
23564627
NCBI-ProteinID:
XP_011391128
UniProt:
A0A0D1DSM6
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All DBs
Position
14:complement(491585..492206)
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AA seq
146 aa
AA seq
DB search
MLPLSLLNAAQNKPMLVELKNGSTFNGHLVACDNFMNLTLREVYETSASGEQFWKQKECY
IRGSTIKYCRVADSVIDQVRQREEQARKQRQQSGSSANVSGGANSANRAGAANGARGAYT
RGARGGTADRGARGTNAGARGRGRGQ
NT seq
441 nt
NT seq
+upstream
nt +downstream
nt
atgttgccactatcgcttctcaatgcggcgcaaaataagccgatgctcgtggagctcaag
aacggatcgacgttcaacggacacttggtagcgtgcgacaactttatgaatctgacgttg
cgagaggtgtacgagacgagtgctagcggagagcaattttggaagcagaaggagtgttac
attcgcggtagcacgatcaagtactgccgagtagcggattccgtaatcgaccaggtcagg
caacgcgaagaacaggcgaggaaacagcgtcaacaatcgggtagctcggcaaatgtctcg
ggcggcgccaactcggccaatcgagccggcgcagccaacggggcaagaggtgcatacacc
agaggcgctagaggcggcacagccgatcgaggcgcaagaggcaccaatgcaggtgcaagg
ggtagaggtagaggccaatga
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