Mycosarcoma maydis: UMAG_04623
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Entry
UMAG_04623 CDS
T01021
Name
(RefSeq) putative replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
uma
Mycosarcoma maydis
Pathway
uma03030
DNA replication
uma03410
Base excision repair
uma03420
Nucleotide excision repair
uma03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
uma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
UMAG_04623
03410 Base excision repair
UMAG_04623
03420 Nucleotide excision repair
UMAG_04623
03430 Mismatch repair
UMAG_04623
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
uma03032
]
UMAG_04623
03036 Chromosome and associated proteins [BR:
uma03036
]
UMAG_04623
03400 DNA repair and recombination proteins [BR:
uma03400
]
UMAG_04623
DNA replication proteins [BR:
uma03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
UMAG_04623
DNA Replication Termination Factors
ELG1-RFC complex
UMAG_04623
Chromosome and associated proteins [BR:
uma03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
UMAG_04623
DNA repair and recombination proteins [BR:
uma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
UMAG_04623
Check point factors
HRAD17(Rad24)-RFC complex
UMAG_04623
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_assoc_2
AAA_lid_RFC1
AAA_24
RuvB_N
AAA_11
AAA_14
RCF1-5-like_lid
AAA_22
DUF815
AAA_5
AAA_30
AAA_16
ResIII
AAA_7
DEAD
nSTAND_NTPase5
WGG
Mg_chelatase
Viral_helicase1
AAA_28
AAA_19
AAA_3
nSTAND3
bpMoxR
AAA_25
RNA_helicase
DNAX_ATPase_lid
Motif
Other DBs
NCBI-GeneID:
23564748
NCBI-ProteinID:
XP_011390916
UniProt:
A0A0D1DT93
LinkDB
All DBs
Position
13:complement(406960..408097)
Genome browser
AA seq
341 aa
AA seq
DB search
MTSKGKGKADDATATDQQLDLLPWVEKYRPATLDDLVSHKDITSTIQNFIDKNRLPHLLF
YGPPGTGKTSTILAMARKIFGPQFRNSVLELNASDDRGIDVVREQIKSFASTKSVFSSKG
GFKLIVLDEADAMTQAAQGALRRVIEQYTKNVRFCIICNYVNKIIPAIQSRCTRFRFNPL
ELDQVEDRLNHVIESEGCNITQDGKEALLKLSRGDMRRALNVLQACHAASDHIDETAVYN
CTGNPHPHDIEAILKSMMEDEFTTAFWTVSQLKTAKGIALADIITGFYDLLTTIKLPAKS
RIYLLDHLADTEHRLSTGGSEKIQLTALLGAVKVAVELSQA
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccaaaggcaaaggcaaggcggatgacgctaccgcgacagaccaacagctcgat
ctgcttccctgggtagagaagtaccgtcccgcgacgcttgacgatctcgtatcacacaag
gacatcacgtctaccatccaaaatttcatcgacaagaaccgtcttccacacctgctcttc
tacggtccaccaggaaccggcaagacgtcgacaatcctagccatggcacgcaagatcttc
ggcccacaattcaggaacagcgttctcgagctcaatgcgtcggatgaccgtggtatcgat
gtagtccgagaacaaatcaagagtttcgctagcaccaagagcgttttcagctctaagggc
ggtttcaagctcatcgtgctcgatgaagccgatgccatgacccaagctgcccaaggagca
cttcgccgagtcattgagcaatacaccaaaaacgttcgtttctgcatcatctgcaactac
gtcaacaagatcatccccgcgatccaatcccgttgcacgcgtttccgattcaatccgctc
gaactcgaccaggtcgaagatcgtctcaaccacgtcatcgaatcggaaggttgcaacatc
acccaggacggcaaagaggcgttgttgaagctctcccgtggagacatgcgaagagcgctc
aacgtgttgcaagcgtgtcatgctgcgagcgatcatattgacgaaaccgctgtgtataat
tgcacgggcaacccgcatccacacgacatcgaagccatcctcaaatcgatgatggaggat
gagtttacaacggcattctggaccgtgtcccaactcaaaacggcaaagggaatcgcattg
gcggatatcattactggattctatgatttactgactaccatcaagttgccggctaaatcg
aggatttatttattggatcacttggcggataccgaacatcgattgagtacaggcggctca
gaaaagatccaactcacagccctgctcggcgctgtcaaggtcgccgtcgagctctcgcag
gcataa
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