Mycosarcoma maydis: UMAG_04701
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Entry
UMAG_04701 CDS
T01021
Name
(RefSeq) putative rcd1 protein involved in sexual development
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
uma
Mycosarcoma maydis
Pathway
uma03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
uma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UMAG_04701
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uma03019
]
UMAG_04701
Messenger RNA biogenesis [BR:
uma03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
UMAG_04701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
23564796
NCBI-ProteinID:
XP_011391592
UniProt:
A0A0D1DQF4
LinkDB
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Position
17:complement(23193..24479)
Genome browser
AA seq
428 aa
AA seq
DB search
MAGRPATAGSMPGRRIHTPSPMLGNGLVDGNNSNANSNGSIGASLPPPPGTGGSLAGVDL
GPSMLSAAGPPPNAGPTMPAGTGPGGTPTTALSVYHLITQLCQRPEPNASNRKQRCASPA
TANSTSSTNADGTPSSANATKTVDSQTSQSNSEREGATSPNDFDKLPGSSAQREHALLEL
SKKREQYEDLALVLWHSFGVMSSLLQEIVSVYPLLSPPALTAQASNRVCNALALLQCVAS
HSETRGLFLQAHIPLFLYPFLNTTSKTRPFEYLRLTSLGVIGALVKQNDNSDVITFLLST
EIIPLCLRIMETGSELSKTVAIFIVQKILLDDMGLAYICQTYERFYAVGTVLSNMVSQIV
ESQAVRLLKHVVRCYLRLSDNPRAREALRACLPGPLRDATFQQLLKNDHITKRCLATLLL
NLSDRVEQ
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggctggccgaccagccaccgcgggcagcatgccgggccgtaggatccacacccctagt
cccatgcttggcaacggtctcgtcgatggcaataattctaacgccaacagcaacggctcc
attggtgcctctcttcctcctcctcccggcacgggcggctctctggccggtgttgacctc
ggcccttcgatgctttctgctgctggtccgcctcccaatgctggtccgaccatgcctgca
ggtacgggtccaggcggtacacctaccacggctctcagcgtctatcatctcatcacgcag
ctctgccagcgaccggaacccaacgcctccaatcgcaagcagcgttgtgcatcgcctgct
accgccaacagtaccagcagcaccaatgcggatggaacaccttcgtcggccaacgcgacc
aagacggttgattcgcaaacgagtcagagcaacagtgagcgggaaggtgccacttcgcct
aacgatttcgacaagctgccaggatcgtctgcgcagcgtgagcatgcgctgctcgagttg
agcaagaagcgcgagcagtatgaagacctggcgctggtgctctggcatagctttggcgtc
atgtcgtctttgctccaggagatcgtgtctgtctacccgctgctctcgccgccagctctc
actgctcaggcgagcaatcgtgtgtgcaacgcactcgctctgctgcaatgcgtcgcgagc
catagtgagacacgcggcctgttcttgcaagcacacatcccgctcttcctctacccattc
ctcaacacgacgtccaagacgcgtccgttcgagtacctacgattgacgtcgctcggcgtg
atcggcgcgctggtcaagcagaacgacaactcggacgtcatcactttcctcctctcgacc
gagatcatcccactgtgcctgcgcattatggagaccggctcggaactgagcaaaacggtg
gccatctttatcgtgcaaaagatcctgctggatgatatgggattggcctacatttgtcaa
acgtacgaacggttctatgcggtaggcaccgtgttgagcaacatggtttcgcagattgtc
gagagtcaggcggtgaggctgctcaagcatgtggtcaggtgttacctgcgactcagcgat
aatccaagggcaagagaggctcttagggcgtgtctgccgggaccgctgagggatgctacc
ttccaacaactgttgaagaacgatcacatcacaaagaggtgcttggctacgctgttgctc
aatctttcggatcgggtcgagcagtaa
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