Mycosarcoma maydis: UMAG_04794
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Entry
UMAG_04794 CDS
T01021
Name
(RefSeq) putative TFIIB subunit (transcription initiation factor), factor E
KO
K03124
transcription initiation factor TFIIB
Organism
uma
Mycosarcoma maydis
Pathway
uma03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
uma00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
UMAG_04794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
uma03021
]
UMAG_04794
Transcription machinery [BR:
uma03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
UMAG_04794
Prokaryotic type
Archaeal type
TFB
UMAG_04794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
RB_B
AlphaC_N2
Motif
Other DBs
NCBI-GeneID:
23564861
NCBI-ProteinID:
XP_011391657
UniProt:
A0A0D1DW38
LinkDB
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Position
17:complement(278631..279758)
Genome browser
AA seq
375 aa
AA seq
DB search
MTADIARSSQNTFAQPFALSARYAADRGDAPKGEDDFVPDLNVRLICRDCKTDPPNLAEE
FESGDLVCADCGLVVGENIIDTRSEWRTFANEDGDDPSRVGAASNPLLDGINEQLESRIG
YRDGGTGASRDLQRTMNRATGTRDRNMLDAFEDIQRKCDSIHLPRTVSDVAKQAYRRVEE
EKILRGKKPDAIIAAAIYVACKMNHVPRTFPEICSLTSVSKKHIGQCFKEMQQAFGLNAT
GTGSVDGSRASANNSGTSTPIGIGPTGAADLVGRYCNHLGLEMRITRSTEDITARVRELG
ILAGRSPITIAAACIYFSTLLWGVDKGAKRISQAAGVSDVTIKNSFKELLKHKDKIATPE
ILSKSPQMDMSRLDV
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgacggcggacattgcccgatcttcacagaatacctttgctcagcctttcgcacttagc
gccaggtatgctgctgaccgcggtgatgcgcctaaaggcgaggatgattttgtgccggat
ctaaacgtccgcctgatttgccgtgactgcaagacggatccacccaacttggcggaagaa
ttcgagtctggtgatctggtttgcgccgattgcgggcttgtggtgggcgagaatatcatc
gatactcgatctgaatggcgtacttttgccaacgaggatggtgatgatccatcgcgtgta
ggtgcagcgagcaacccgctgctggacggtatcaacgagcagctcgagtcgcgcatcgga
tacagggatggcggcacaggtgcttcgagggatctgcagagaaccatgaaccgtgctaca
ggtacaagggaccgcaacatgttggacgcgtttgaagacatccagcgcaagtgcgattcg
atccatctgccaaggacagtctcggacgtggctaagcaggcgtatcgacgtgtggaagaa
gaaaagatccttcgcggaaagaagccggacgccatcatcgccgctgccatctacgtggct
tgcaagatgaaccacgtgccacgaacatttcccgaaatctgctcgctcaccagtgtgtcg
aagaagcatattggccagtgcttcaaggagatgcagcaggcgtttggtttgaatgctacg
ggtaccggatcggtggacggatcgagggctagtgccaacaacagcggcacatcgacaccg
attggtattggaccgacgggtgcggcggatctggtgggtcgttattgcaaccacttgggt
ctcgagatgcgcatcacacggtcaacggaagacattacggcacgcgtacgcgagcttggc
atcttggcaggccgcagtccgatcaccattgcggccgcctgcatctatttttctacgctg
ttgtggggcgtggacaagggagccaagcgcatcagccaggctgcaggcgtcagcgacgtg
acgatcaaaaactctttcaaggagcttctcaagcacaaggacaagattgccacgccagag
attctgtccaagagccctcagatggacatgtcgcgcctcgatgtctga
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