Mycosarcoma maydis: UMAG_05429
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Entry
UMAG_05429 CDS
T01021
Name
(RefSeq) hypothetical protein
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
uma
Mycosarcoma maydis
Pathway
uma03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
uma00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
UMAG_05429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
uma03021
]
UMAG_05429
03019 Messenger RNA biogenesis [BR:
uma03019
]
UMAG_05429
Transcription machinery [BR:
uma03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
UMAG_05429
Messenger RNA biogenesis [BR:
uma03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
UMAG_05429
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCHC
Torus
zf-CCCH_2
zf-CCCH_RBM22
zf-CCCH_DUS3L
Motif
Other DBs
NCBI-GeneID:
23565329
NCBI-ProteinID:
XP_011392115
UniProt:
Q4P384
LinkDB
All DBs
Position
19:<546701..>547801
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AA seq
366 aa
AA seq
DB search
MNAPLTLHRSGAGPSSYSSHRPLITQQRLVGASSSIPSQFIHNEFSFEQYIKDHLNVKLD
NDAQICPDYSERLQCPRGASCPRRHVRPSHLNFLPAGSTALRDPNKRTVCKHWLRGLCKK
DDQCDYLHEYDMRRIPECRFYATFGFCNSGDDCLYLHVDPAIKRRECERYNRGFCPKGPL
CTKKHVRRVACPLYLAGFCPEGLDCPRGHVKSTPASSASRSNSPIQTHRPLTAAEAFGTG
TGRGDEYGDGAGMRNQRAPAGRYGLPSGGAAGGAGAADIGASRGGMGYANNMQRRPNNVF
GAPAQGAQEGGRGWRKDLSEVLCFKCGEMGHFANMCPNPALPGNRGGVERGPGGQARQAR
DRPRPY
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgccactcacgctgcatcgaagtggtgcgggaccaagctcgtattcgtcacat
agaccgttgataacacagcagcgacttgtaggagcctcgtcttcgataccttcgcaattc
atccacaatgaattcagttttgagcagtatatcaaggatcacctgaatgtcaagctagat
aacgatgcgcaaatctgtccagactactcggaaaggcttcagtgtcctcgcggtgcgtca
tgccccaggcggcatgtcaggccaagccatctcaacttcctgcccgcaggatctacggcg
ctgcgagatccgaacaaacgcacggtgtgcaagcactggcttcgaggcttgtgcaagaag
gacgaccaatgcgactatctgcacgaatacgatatgcgaaggatacccgagtgcaggttc
tacgccacctttgggttctgcaacagtggtgacgactgcctgtatcttcacgtcgatcct
gcgatcaagaggcgcgaatgcgaaaggtacaaccgagggttttgccccaaagggccactg
tgcacaaagaaacacgttcggcgtgttgcgtgtccactctatttggcgggcttctgccct
gagggacttgactgcccacgtggacatgtcaagagcaccccggcttcgagtgcatcgcgg
tccaattcgcccatccagacgcatcgacccttgacagcggccgaagcatttgggacgggc
acgggtcgcggcgacgagtatggggacggagcaggtatgcgtaatcagcgtgcacctgca
ggaagatacggtttgcctagtggaggtgcggctggaggagcgggggcagcggatatagga
gcatcgcgcggaggcatgggctatgccaacaacatgcagagacgtcccaacaatgtcttc
ggagcgccagcacaaggagcgcaagagggtgggagaggatggcgaaaggatctgtccgag
gtgctttgctttaaatgtggagagatgggccacttcgccaacatgtgtccgaatccagca
cttccaggcaatcggggtggtgttgagcgtggtccaggaggacaagcacgacaagcacga
gatcgaccacgtccgtactag
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