Mycosarcoma maydis: UMAG_05432
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Entry
UMAG_05432 CDS
T01021
Name
(RefSeq) hypothetical protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
uma
Mycosarcoma maydis
Pathway
uma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
uma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
UMAG_05432
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
uma03041
]
UMAG_05432
Spliceosome [BR:
uma03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
UMAG_05432
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
PRP4
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_WDR75_2nd
WD_LRWD1
WD40_like
Nbas_N
eIF2A
Beta-prop_SPT8
Beta-prop_DCAF12
WDR54
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
23565331
NCBI-ProteinID:
XP_011392117
UniProt:
A0A0D1CHJ8
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Position
19:complement(554555..556075)
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AA seq
506 aa
AA seq
DB search
MDVDSPSLPDAPSTSGVTIEDLLSSHSNVVSASDAALSAQLDARKMARNLAIPTSDAKVR
LRLRQLGHPITCFGEREMDRRQRLRQVLAQQLQAQQPSGNTLSTASGAQSHTSEQSDSDT
ESDGDDQDEEFYTEGPSSLIQARRNIACFSLQRSKQRLAQQRREATVPLSSIVHIRSKLF
YPIKSYSNLGSQVGDDRPVSITRFAPNSQLLATASWSGSIKLWQVPSANHKLTLRAHTDK
VGGLAWHPQATLSQHASAVNLVSGAGDATVCLWSLDSDRPLATLKGHEARVARTAFHPTG
NYVASASFDGTWRLWDVCTSDCLTIQEGHSKEVYSVEFQDDGALLASGGLDAIGRVWDMR
TGRTAMVLDGHAKEILSIDFAPNGYQLATASGDDTVRIWDMRALKSIYTIAAHKSSVSDV
RFFRSLSHRKSPYSMHTQQDEISRDGLYLATSGYDGMVRIWSADDWQLLRTLSGDAGRVM
SVDISSDGEMLVSGEWGRTFKLWGSL
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcgattccccttctttgccagatgcaccatccacctcgggcgtcacgatcgaa
gacctgctttcgtcacactccaacgttgtgtctgcctccgatgctgccttgtccgctcag
ctggatgcgcgcaagatggctcgcaacctagccataccaacttccgatgcaaaggtaagg
ctacgtctacgtcagctcggccatcccatcacctgcttcggcgaacgtgaaatggatcgt
cgtcaacgtcttcgccaagtcctcgctcaacagctgcaagcgcaacaaccgtctggtaat
actctgtccactgcttcaggcgcacagtcccatacatcagagcaaagcgacagcgatacc
gagtcggacggcgacgaccaagacgaagagttctacaccgaaggtccatcttccctcatc
caagcacgtcgtaacatcgcttgcttttccttgcagcgatccaagcaaaggctggctcaa
caacgcagagaggctaccgtaccactctcctcgatcgtccatatacgctccaaacttttc
taccccatcaagtcgtacagtaaccttggctcgcaggttggcgacgaccgtcccgtatcc
ataacacgttttgcgcccaactcgcaattgcttgcgacagccagttggtccggcagcatc
aagctctggcaagtgccgagtgccaaccacaagctcacccttcgcgcgcataccgacaaa
gtgggcgggctggcgtggcatccgcaagccaccttgagtcagcatgcttcggcggtcaac
ttggtgtcgggcgctggtgatgccaccgtctgcctgtggagtctcgacagcgaccgtccc
ctagctacgctcaaaggtcatgaggcacgtgtcgcaagaaccgctttccatcccacggga
aactatgtagctagcgcctcgtttgacggtacctggcgtctgtgggacgtctgcacctcg
gactgcctcaccatccaggaaggtcacagcaaggaggtgtactctgtcgaattccaagac
gatggtgcgctgctagccagtggtggtctggacgccatcggcagggtgtgggacatgcgt
actggcagaacggcgatggtacttgatgggcacgctaaagaaattctttcgatcgacttt
gctcccaacggctatcagcttgctacggcgagtggagacgacacggtcaggatctgggac
atgcgagcgctcaagtcgatctacacgatcgcagcgcacaaatcgtcggtctcggacgtt
cgcttcttccgttcactctcgcaccgcaagtcgccctactcgatgcatacccaacaagat
gagatcagccgcgacggcctctaccttgccacctccggatacgatggaatggtcaggatc
tggtcggccgacgattggcagctgctcagaacactcagcggcgacgccggcagagtcatg
agtgtcgacatcagctccgacggcgagatgctcgttagcggcgaatggggtcgcaccttt
aagctctggggttcgctctaa
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