Mycosarcoma maydis: UMAG_05540 Help Entry UMAG_05540        CDS       T01021                                  Name (RefSeq) hypothetical protein   KO K12604   CCR4-NOT transcription complex subunit 1 Organism uma  Mycosarcoma maydis Pathway uma03018   RNA degradation Brite KEGG Orthology (KO) [BR:uma00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     UMAG_05540  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:uma03019]     UMAG_05540 Messenger RNA biogenesis [BR:uma03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      UMAG_05540   mRNA degradation factors    3'-5' decay     Ccr4-NOT complex      UMAG_05540 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Not1 CNOT1_CAF1_bind DUF3819 CNOT1_TTP_bind CNOT1_HEAT ARM_Cnot1 NOT1_connector TFIIA Motif Other DBs NCBI-GeneID:  23565401 NCBI-ProteinID:  XP_011391852 UniProt:  A0A0D1DQ67 LinkDB All DBs Position 18:307043..313399 Genome browser AA seq 2118 aa AA seqDB search MFNGSAPPNGGGAEANTLAANQGIIKSILDALSRDDSKPVVSLDQHALLLETLLSDALPN TPILHPAQRQKLFNAIADKVGPDATADAVRQALPKLKIKPEKNVADLLIELGVRGLPTVD TARAVFQRFGLTEANPPDERMVSEILAILLSVDPAIFESDRVTNFANLVHALAAIQQQLS WPRIIRALDELDGFNPSFHGHMAGMADLLLHAPVQGQISAVSGLWGPWHHRLRQLQILHG LLALGSDTFSFATLPGRCILAPEQLTDAPNSIQNAAQPLLNSTYNSLDLVETLIEISASD DQNVRSAVQEVLEQAIKACPELILLGLVQIPQPWNAIHAELASQLLTMFMTPHNSSLLVF YRILHTQRDYLLNAFRNFYLENQLNLTRIVDVAQSLDMVDDLVEARPFAFALDVAALASR REAIDLDAWLQDNINRHGSDFIRAVLEFLDIKAKDDLAKPDPQAEQSFVPLTVQNVASFL KALRSNGESMTAEEIDFFKGVRNVCLQLHPRLMNLAPGAEGQEPGLQVVTFSQDIHEEAD SWYRQMYEGKISIEDIVLLLQRTRASDNPREHQIFACMVHTLFDEYRWFEMYYPAAELEM TAVVFGSLIQYQLIDYIPLGIAIRYVLDALRNPPDSSMFKFGLQALLRFQNRLPEWPQLC QALLSMPHLQQSYPHIIRLVKMALAGQLPGADVGMPGGQSLEDKKAPFPAIRADPLPQDE EQRDPSEEITDKVLFLVNNLSPTNLESKLGDARQLITADTYRWFSNYLVLQRISIEPNNH GLYAQFLDGLDAKGLMTYILHETLAKCQMLLNNDKTVQSTQERNLLKNLGSWLGSLTLAR DKPIRHRNIAFKELLIQGYDSNRLIVAIPFVCKIMEQCVKSNVFKPPNPWLMAVLRLMVE LYQFAELKLNLKFEIEVLFKGLNVELKDVPPTTILRNRPSAELQQQQQQQQQQQQQQQQH QSRGHLQHLSQQQQQQAAAQMQLQHQRQHQQQLSQQPATGIAQDLERLSLAGGYSAAAGG RMGPQSQKASAAAAAVAAAGSGAQPGQSAAAAAAYTEALVSMLQSLPQYVVINPQLTMFS SNAALKRLIYIAIDRAIREIIAPVVERSVTIASISTRELVTKDFAMEGDEEKMRISAHQM AQNLAGSLALVTCKEPLRISMVANARTLLLSNGFTEQNVPEQALMVIMQENLDLACSVIE KAAMDKAVPEVDEGLTNAYSSRREHRTRGRGYYWDSAALAASQYAATLPDMLRLRPDGLV PAQLRVYDGFIRRMSPGVDADRSTPTSVHASSVSGPSESGYLEGAAAAAAAAGGAGGAGV LSAVALQEAGAQANLPTSLLPVAPSGTLSAQQSLEKFSQGMTELERLLEAANQESSLSEL PQDHEIRHALRLIPMVAAQSASRDETALAFSQKVVQLLFKIESKLGREVYVLLLDRLCEI SLKAAREVTAWLIYAEDERKFNVPVTVSLVRAGLVNVAELDVQLAKLILRDLGASVMDFS AQLALECLQEPACATRQQLGSTIEALQRAEQRGKATDASKRFLHALESGLLKSKVDVGNT ALREQLAYCFAEWARLFQHSPNPEKSFIDYVTQLQTQGILKGEDISSMFFRVCTEVSVDS YIKQKAVGGSAAMGIFSPIDAFSRLIVLMIKYHADPTGVNNEQAKVHYLTKILSIVVLVL AQSHEELGVHFQQKPFFRLFSSLLHDLHATESSLGDAYTQTLLAISNTLNTLQPSFFPSF TFSWISLVSHRLFMPKLLETNQREGWGAFHRLFASLLRFMSPLLRNAELQDTSRQLYRGT LRILLILLHDFPEFLCDYHQSLCDLVPTSCIQLRNLILSAFPRNIRLPDPFSSSLQITLL PEMAQGPHIASNYVAALNQVEGLRAAIDAHFDQARGKNMSEQLKALLQNATRGTSSTSSI GSSKDEATSASSAVSLSEGGISTSLINSIVLYVGVRSTEAGRSNGNDESGQVVLRWLVVE SAPEARFLVLTAAANQLRFPSSHTAYFSAALLQLFAESEDELVREQLVRVLLERLVIHRP HPWGLVTTFIELIKTQRHRIPRAPAEIQALLDHIAATLAASAHEDNHAQQHQHAHINGRS AFLAQQMMQQQQQQQQQA NT seq 6357 nt NT seq  +upstreamnt  +downstreamnt atgttcaatggctctgctccccccaacggaggaggcgccgaggccaacacgctagccgct aatcagggcatcatcaaatcgattttggacgcactttcaagggacgattccaaaccagtc gtcagcctcgatcagcatgcactcctcctcgagacgctcctctccgacgccttgcctaac acgccaattctccaccccgcgcagcgtcagaagctcttcaatgccattgcagacaaagta gggcccgatgctaccgcagacgctgttcgtcaggcacttcctaagctcaagatcaagccc gaaaagaatgtcgccgacctcctgatcgagcttggtgtccgcggtcttcccaccgtcgac accgctcgtgccgtctttcagcgttttggcttgaccgaggcaaacccacccgacgagcgc atggtctccgagatcctcgccatcctcctttccgtcgatcctgccatctttgaaagcgac cgcgtcaccaactttgccaacctcgtccatgccttggccgccatccagcagcaactatcc tggccccgtatcattcgcgctctcgatgaactcgatgggttcaacccctcctttcacggc cacatggctggtatggccgacctcctccttcacgctcctgttcaaggtcagatctcggcc gtttccggcttgtggggcccgtggcatcaccggctgcgacagcttcagatcctccacggt ctcctcgctcttggctcggacactttcagctttgcaacgctgcccggccgatgcattttg gctccggagcagctcaccgatgcccccaacagcatccagaacgccgctcaacctctcctg aacagcacgtacaattcgctcgatctcgtcgagacgcttatcgagatatctgcctccgat gaccaaaatgtcagatcggctgttcaggaggtgctcgagcaggccatcaaggcttgtccc gagctcatcttactcggcttggtgcagatcccccagccctggaacgccatccacgccgaa ctcgcttctcagctgctcaccatgttcatgacgccccacaacagcagcctcctcgttttc taccgcatcttgcacacgcagcgcgactatctgctcaacgccttccgcaacttctacctc gagaaccagctcaacctcactcgcatcgtcgacgtggctcagagcctcgacatggtcgat gaccttgtcgaagctcgaccgtttgctttcgctctcgacgtggccgcactcgcatcccga cgcgaggccatcgatctggacgcctggcttcaggacaacatcaaccgccacggcagtgac tttatccgtgccgtcctagagtttctggacatcaaagccaaggatgacctcgccaagccc gatcctcaggcagagcagagcttcgttccgctcaccgttcaaaacgtcgccagcttcctc aaggccctgcgctccaacggcgagagcatgactgccgaagaaatcgattttttcaaaggc gtccgcaacgtttgtcttcagctccatcctcgcctcatgaacctggcgccaggtgcagag ggccaggaacctggattgcaggtcgtcactttttcgcaagacattcacgaagaggccgat tcgtggtatcgtcagatgtatgagggcaagatcagcatcgaagacattgtgctcctgctc cagcgcactagggcctccgacaatcctcgcgagcaccaaatctttgcctgcatggtgcat accctctttgacgagtatcgttggttcgagatgtactaccccgccgccgagcttgagatg acggccgtcgtctttggttccctcatccagtatcagctcatcgactacattccgctcggc atcgccatccgctatgttctggatgcacttcgcaacccgcccgactcgagcatgttcaag tttggccttcaagccctattgcgctttcagaatcggttgcccgaatggcctcagctctgc caggctctcctttccatgccgcatctccagcagtcttatcctcacatcatccgtctcgtc aagatggctctggctggtcaattgcctggtgccgatgttggcatgcccggtggccagtcg ctcgaggacaagaaggcgcccttccccgccatccgcgctgatccgttgcctcaagacgaa gagcagcgcgaccctagcgaagagatcactgacaaggtgctttttctcgtcaacaacctc tcgcccaccaacctcgagtccaagcttggtgatgctcgacaacttatcacggccgacacc taccgatggttctccaactacctggtcctgcaaaggatcagtatcgagcccaacaaccac ggcctttacgctcaatttctcgacggcctcgatgccaagggactcatgacctacatcctg cacgaaacactcgccaagtgtcagatgctgctcaacaacgacaagacagtccagtccacg caagagcgcaacctactcaaaaacctgggctcttggctcggcagccttactctggcacgc gacaagcctatccgtcaccgcaacatcgccttcaaggagcttctcatccaaggctacgac agcaatcgactcattgtggccattccctttgtctgcaagatcatggagcagtgtgtcaag tcgaatgtcttcaagcctcccaacccgtggctgatggccgttcttcgtctgatggtggag ctctaccaatttgcagaactcaagctcaacctcaagttcgagatcgaggtcctctttaag ggtctcaacgtcgaactcaaggatgtcccccccaccaccattctacgcaatcgtccatct gccgagttgcagcagcaacagcaacagcaacagcaacagcaacagcaacaacaacagcac caatctcggggtcatctccaacatctcagtcagcagcagcaacagcaggctgcagcacag atgcagctgcagcaccagcgccagcatcagcagcaactctcccagcagccagccaccggc atcgcccaagacctcgagcgtctctcgcttgctggggggtacagtgctgccgctggtggc cgcatgggtcctcaatcgcaaaaggccagcgctgctgctgctgccgtggctgcagctggt tccggtgcacagcccggccaatcggctgcagccgctgccgcttacaccgaggcgcttgtg tcgatgcttcagagtctgccgcagtacgtggtcatcaatccgcagcttaccatgttcagc agcaacgcagcactcaagcgactcatctacatcgccattgaccgtgccatccgcgagatc attgcgcccgtcgtcgagcgatccgtcacaatcgcttccatctcgacgcgcgagctcgtc accaaggactttgctatggagggcgacgaagaaaagatgcggatctcggcacatcagatg gcacagaacctcgccggcagccttgccctcgtcacctgtaaggagcctttgcgcatcagc atggtagcgaacgcgcgcaccctgctcctttccaacggcttcaccgagcaaaacgtaccc gaacaggcattgatggtcattatgcaggagaacctcgaccttgcctgttccgtgattgaa aaagcagccatggacaaggcggtgccggaagtggatgagggcctcaccaacgcctactcc agccgccgtgagcaccgcacacgtggtcgcggctactactgggatagcgccgccttggcc gcttcgcagtatgccgccactctgcccgacatgctacgtctgcgacctgacggccttgtc ccggcccagctgcgcgtttatgatggcttcatccgccgcatgtctcctggtgtcgatgcc gaccgtagtactccaacctcggtccatgcctcgtctgtctctgggccatccgaatccgga tacctggaaggtgcagcagcagcagcagccgctgctggtggtgctggaggtgccggagtt ctcagtgcagtagcgcttcaagaggcaggcgcccaggccaacctccccactagtctgctc cctgttgctcctagcggtacgcttagcgctcaacagtcgctcgaaaagttctcgcagggt atgaccgagcttgagcgattgctcgaagcagcaaatcaggaatcatctctcagcgagctg ccgcaggaccacgagatccgacatgcgcttcgtctgatcccaatggttgctgcccagtct gccagtcgcgatgagactgcgctggccttttcacaaaaggtggtgcagcttttgttcaag atcgagtctaagctcgggcgcgaagtctacgttttgctgctcgaccgactgtgcgaaatc tctctcaaggcggctcgcgaggttactgcttggctcatctatgccgaagacgaacgcaag ttcaacgtgcctgtcaccgtgtcactggttcgcgctggattggtcaacgtggctgagctt gatgttcagctcgccaagctcatcctgcgcgacctcggtgcgagtgtcatggatttttcg gctcaacttgcgctggaatgtcttcaggagcctgcctgtgctactcgccagcaacttggc agcactatcgaagcgctgcagcgcgctgagcaacgaggcaaggccacggacgcgtcgaaa cgcttcctgcacgctctcgaaagcggtctgctcaagagcaaggtggacgtcggcaacact gcgctgcgcgagcagcttgcgtactgctttgctgaatgggcgcgtctctttcagcattct cccaatccggaaaagtcgttcatcgactatgtcacacaactgcagacgcagggcatactc aagggcgaggacatttcgtcgatgtttttccgcgtctgcaccgaggtcagcgtggacagc tacatcaagcagaaggcggtcggcggctcggcggctatgggcatcttctcgccgatcgat gcgttttctcgtctgatcgtgctgatgatcaagtaccatgccgatcccacaggcgtcaac aacgagcaggccaaagtgcactacctgaccaagatcctgtcgattgtggtgctggtgctg gcccagtcgcacgaggagcttggagttcactttcagcaaaagcccttcttccgactgttt tcgagcttgctgcacgacttgcacgcaaccgagtcgagcctgggtgatgcgtacacgcag acgctactggcgattagcaacacgctcaacacactgcagccttcgttcttcccgagcttc acattctcgtggatttcgttggtgtcgcatcgcttgttcatgcccaagctgctcgagaca aaccagcgggaaggctggggagctttccaccgactgtttgcgtcgctgttgcgcttcatg tcaccgctgctgcgcaacgctgagctgcaagacacttcgcgtcaactctatcgcggaacg ctgcgtattctgttgattctgctgcacgacttccccgagttcctatgcgactaccatcag agcttgtgcgacctggtgcctacgtcgtgcatccagttgcgcaacttgatcctgagcgcg ttcccgcgcaacatccgcctgccggatcctttcagctcaagcttgcagatcaccctgttg cccgagatggctcaaggaccgcacattgcctcgaactatgtcgcagcactcaaccaggtc gagggactgcgcgcggccattgacgcacactttgatcaagcacgaggcaaaaacatgtcg gagcagctcaaggctctcttgcagaacgccacgcgtggcacgagctcgacgagcagcata ggctcgagcaaagacgaggcgaccagcgccagctccgctgtgtcgttgtcggaaggcggt atcagcacgagcctgatcaactcgatcgtgctctacgtaggtgtgcgatccaccgaggcg ggccggagcaatggtaatgatgagagcggccaagttgttcttcgatggcttgtggtcgag tcggcacctgaagcacgattccttgtactcactgcggcagccaaccagctgcggttcccg tcgagccacacggcctacttttctgctgccctgttgcagcttttcgccgaaagcgaggat gagcttgtgcgcgagcaattggtacgtgttcttctcgaacgactcgtcatccaccgacct cacccgtggggattggtgacgacgttcatcgagctgatcaagacgcagcgccaccgcatt ccacgtgcgccggcagagattcaggctcttctggaccatatcgccgctacgctcgcagcg tcggctcacgaagacaaccatgcgcagcagcatcagcatgcgcatatcaatggacgctct gcctttttggcacagcagatgatgcaacagcagcagcaacagcagcaacaggcataa

DBGET integrated database retrieval system