Mycosarcoma maydis: UMAG_05829
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Entry
UMAG_05829 CDS
T01021
Name
(RefSeq) putative mago nashi protein, exon junction complex
KO
K12877
protein mago nashi
Organism
uma
Mycosarcoma maydis
Pathway
uma03013
Nucleocytoplasmic transport
uma03015
mRNA surveillance pathway
uma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
uma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
UMAG_05829
09122 Translation
03013 Nucleocytoplasmic transport
UMAG_05829
03015 mRNA surveillance pathway
UMAG_05829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uma03019
]
UMAG_05829
03041 Spliceosome [BR:
uma03041
]
UMAG_05829
Messenger RNA biogenesis [BR:
uma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
UMAG_05829
Spliceosome [BR:
uma03041
]
Complex C
Other components
EJC/TREX
UMAG_05829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mago_nashi
Motif
Other DBs
NCBI-GeneID:
23565609
NCBI-ProteinID:
XP_011392195
UniProt:
A0A0D1CGJ7
LinkDB
All DBs
Position
20:complement(97289..98032)
Genome browser
AA seq
145 aa
AA seq
DB search
MSDFYVRYYTGHQGRHGHEFLEFEYSRGRLRYANNSNYRNDSLIRKEMWISPLMVDELRR
IVEESEIMREDDANWPKRNSTGRQELEVRLGKEHISFETAKIGSLVEVQDSEDPEGLRVM
YYLVQDLKCLIFSLISLHFKIKPIA
NT seq
438 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacttttacgtccgatactacaccggacaccagggcagacacggtcatgagttt
ctcgagttcgaatactcccgaggtcgattgcgctatgccaacaactccaactatcgcaat
gacagtctaatccgcaaagagatgtggatcagcccgctcatggtagacgagttacggcga
atcgtagaagagtccgagatcatgagggaagacgatgccaattggcccaagaggaattct
acaggtcgacaggagctcgaagtgaggttgggtaaggaacacatatcgtttgagacggcc
aagattggctcattggtagaagtgcaagacagcgaagatccagaaggtcttcgtgtcatg
tattacctcgtacaggatctaaagtgtcttattttcagtttgatctctctgcacttcaag
atcaagccaattgcttaa
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