Mycosarcoma maydis: UMAG_10033
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Entry
UMAG_10033 CDS
T01021
Name
(RefSeq) hypothetical protein
KO
K15172
transcription elongation factor SPT5
Organism
uma
Mycosarcoma maydis
Pathway
uma03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
uma00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
UMAG_10033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
uma03021
]
UMAG_10033
03019 Messenger RNA biogenesis [BR:
uma03019
]
UMAG_10033
Transcription machinery [BR:
uma03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
UMAG_10033
RNA polymerase I system
UMAG_10033
Messenger RNA biogenesis [BR:
uma03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
UMAG_10033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW4_SPT5
KOWx_SPT5
Spt5_N
KOW
KOW2_Spt5
Spt5-NGN
KOW5_SPT5
KOW1_SPT5
CTD
KOW7_SPT5
Motif
Other DBs
NCBI-GeneID:
23566108
NCBI-ProteinID:
XP_011386622
UniProt:
Q4PIC4
LinkDB
All DBs
Position
1:350096..352960
Genome browser
AA seq
954 aa
AA seq
DB search
MDDNIEIKREDQTSHALVPDKDRKSRIQHGGKRPIDPFAAEDDDEEEERGDAVDEQDQDD
DEDDDEDDDDDDDDEDDDEDDEEDDTARGQRRRAKKQRRNRFLDVEAEVDDDEEDLDEEE
EELAREDGFIEEDIPDDTEDVQRRAAADNQRLDRFRRQEEDTNAEALAEELRQRYGRSAR
YAAQSDYAEVPQRLLMPSVEDPSLWGVPCKPGRERDIVMTLVRKAMAENFTSSPMRIISA
FCRDSIPGRVYVEARRADDVVKACNGLAGAYARQTTSLHLIPISEMADLLKLQKVQNEIQ
VGGWVRIKRGKYAGDLAQVLDVSENGEEVGLKMIPRIDLNPKDSGLYTDSLGRKRKKGAG
SSATTVAFRPPQRFFNPEEVQKAYPRDTPTKRGSQWVFQNDSYRDGYLEKDVRVTGIITE
NVNPTLDEITKFAGESSIEDGINKLGAVDLSLIADASKKATEALIQPKDQVEIFEGEQAG
VYGTVKAINNEVITIQLEHEDLMDQIVEVPARSVRKRFKPGDHIKVMSGKHADETGLVVK
VEDNVTTFLSDLSMQEVSVFSKDIRQAAEVGSGVNVISGYELHNLVQLDAQTVGIIFNIE
RESFKVLDQTGQVVTVKPHQISTKKDTSRAFALDHDGNEIRAGDMVKEVAGPFSRLRQGQ
VLHIYQSMVVFLHNREYTENGGVFIARARSLEPLAPKSVSTKTKKDGGDLSKMNPALSNL
SGGGANDVRVEGVRRFGGRDMHKGKNVAIIKGPYKTYRGRITETTGNMARIELTSVSKPI
TVSLDWLVEKDPITGRSTKLNAGGFGGPSRGGHSGTGSRMGGASSNPYSSGSTSMGAGGR
YNPYGGSQPAAAVGSYGGSSGTGAGGYGGYSQPVATSAAGASGYGGTGGIGARTPAYNPY
AGDGGKTPAYNPYGDGGKTPAYNPLGDGGKTPAYNAAADGGRTPGYNPYAGDGW
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atggacgacaacatcgaaatcaagcgtgaggaccagacttcgcatgcactggtcccagac
aaagacaggaaatcgagaatccaacacggcggaaagaggccaattgaccctttcgcagcg
gaagatgacgatgaagaggaggaacggggcgatgccgtcgacgaacaagaccaagacgat
gacgaagacgatgatgaagatgacgatgatgatgacgacgacgaagacgatgacgaagac
gatgaggaggatgataccgcacgcggccaacgcagacgtgccaaaaagcaacgtcgcaac
cgtttcctcgatgtggaagccgaggtagatgacgatgaagaggatctcgacgaggaagaa
gaggagctcgctcgcgaggacggcttcatcgaggaagatattcccgacgataccgaagac
gttcagagacgcgctgccgccgacaaccagaggctcgaccgtttccgaagacaagaggag
gacaccaacgcagaagccctcgcagaagagctgcgccagcgctatggtcgatccgcccga
tatgctgcacagtccgactatgccgaggtgccgcagcgcctgctcatgccctccgtcgag
gatcctagtctttggggagtcccttgcaagcccggtcgtgagagagatatcgtcatgaca
ctcgttcgcaaggccatggccgagaactttacttccagccccatgcgcatcatttcagcc
ttttgtcgagactctatccccggcagagtatacgtcgaagcgcgtagagccgacgatgtt
gtcaaggcctgcaacggtctcgccggtgcttatgcgcgccaaaccacctcgctccatctc
attcccatctcagagatggcggatctgctcaagctgcaaaaggttcagaacgagatccaa
gtcggcggttgggtgcgtatcaagcgtggaaagtatgctggtgatttggctcaggtcctc
gatgtttccgagaacggtgaagaagtcggtctcaagatgatcccgcgtatcgacttgaac
ccgaaagacagtggactctacaccgacagcttgggccgcaagaggaagaagggtgctggc
tcgtcggctaccactgtggccttccgtccgccacagcgttttttcaaccctgaagaagtg
cagaaagcctacccaagagacacgccaaccaaacgtggaagccaatgggtctttcaaaac
gacagttaccgtgacggctacctcgagaaggacgttcgagtgacaggtatcatcaccgaa
aacgtcaaccctacgctagatgagatcaccaagtttgcaggtgagagctcgatcgaggac
ggcatcaacaagcttggtgctgtcgatctcagcctgatcgccgatgccagcaaaaaggcc
accgaggcgctcatccaacccaaggaccaggtcgagatctttgaaggagagcaggcaggt
gtctacggtaccgtcaaggccatcaacaatgaagtcatcaccatccagctcgagcacgag
gatctcatggatcagattgtcgaggtaccagcacgcagcgtccgaaagcgtttcaagcca
ggtgatcacatcaaggtcatgtcgggcaagcacgccgacgagacgggtctggtggtcaag
gtcgaagacaacgtcacaacctttctttcggatctgtcaatgcaagaggtatcggtattc
agcaaagacattcgtcaagctgccgaggtgggttccggagtcaacgtcatcagcggttac
gagctgcacaacttagttcagctcgatgcgcagaccgtgggtatcatcttcaacatcgag
cgtgaaagcttcaaggtgctcgatcagactggtcaggttgtcacggtcaagccgcatcag
atcagcaccaagaaagacacgagccgcgcatttgcgcttgaccacgacggtaacgagatc
cgcgcaggagatatggtcaaggaggtggccggtccattctcgcgtctgcgacagggacag
gtgcttcacatctatcaatccatggtcgtcttcctgcacaaccgcgagtacaccgagaat
ggaggtgtctttatcgcacgagcgcggtctctggaacctttggcccccaagagtgtgtcg
accaagacgaaaaaggacggcggcgatctttccaagatgaacccggcgctgtccaacctc
agtggcggaggagccaacgatgttcgcgtcgaaggtgtgcgacggttcggcggacgcgac
atgcacaagggcaagaacgtagccatcatcaaaggaccttacaagacctaccgcggccgc
atcactgagactacgggcaacatggcccgtattgagctcacctcggtgtcaaaacccatc
accgtcagccttgactggttggttgagaaagaccccattactggtcgcagcaccaagttg
aacgctggtggctttggtggacccagtcgtggcggccacagcggaacgggctccaggatg
ggtggcgcgtcaagcaacccttactcgtccggcagtacctcgatgggcgccggtggcaga
tacaatccatacggcggttcgcagccggccgcagctgtcggtagctacggtggatcttcc
ggcactggtgcaggcggttacggtggctactcgcagcctgttgcaacatcagccgcaggc
gctagtggttatggaggaacgggtggtatcggtgcccgaacgccagcgtacaacccctat
gctggagatggcggcaagacaccggcctacaatccttacggcgacggtggtaagacacca
gcttacaacccgcttggtgatggcggaaagacgcctgcatacaacgcggcagcagatgga
ggacgaacaccaggatacaatccttatgccggcgatggctggtaa
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