Mycosarcoma maydis: UMAG_10095
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Entry
UMAG_10095 CDS
T01021
Name
(RefSeq) putative DEAD-box ATP-dependent RNA helicase DBP2
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
uma
Mycosarcoma maydis
Pathway
uma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
uma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
UMAG_10095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
uma03041
]
UMAG_10095
03009 Ribosome biogenesis [BR:
uma03009
]
UMAG_10095
Enzymes [BR:
uma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
UMAG_10095
Spliceosome [BR:
uma03041
]
Complex A
U1 snRNP components
U1 related factors
UMAG_10095
Complex B
UMAG_10095
Ribosome biogenesis [BR:
uma03009
]
Eukaryotic type
Pre-60S particles
Helicases
UMAG_10095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
23566166
NCBI-ProteinID:
XP_011386653
UniProt:
Q4PHU9
LinkDB
All DBs
Position
1:complement(854517..857882)
Genome browser
AA seq
552 aa
AA seq
DB search
MSYGGYSGGSGRGGSYGGGRGGYGGGSSSYGNGGSSYGGGSSYGGGSSYGNGGGGYGGGY
GGGYGGGDRMSNLGSNLGAVDWNSVNLVPFEKNFYVEDPRVSNRSDSEVQQYRASKQMTI
QGQNVPKPVTSFDEAGFPDYILSEIKKMGFSEPSAIQSQAWPMALSGRDLVAIAETGSGK
TIGFALPAMVHINAQPLLKPGDGPIALILAPTRELANQIQVECNRFGGSSRLRTCAVYGG
VPKGPQIRDLQRGAEICIATPGRLIDMVDAGKTNLRRVTYLVMDEADRMLDMGFEPQIRK
ILQQIRPDRQTLMFSATWPKEVQRLAGDFLNNYAQVNIGSTELAANHNVKQIIEVCTEFE
KKGKLIGHLETISAENGKVIIFTSTKRVADDLTKFLRQDGWPALAIHGDKQQQERDWVLA
EFKSGRSPIMVATAVASRGLDVKDISYVINYDFPTNTEDYVHQIGRTGRAGRTGTAYTYF
TPENSKSARELIGILREAKQEIPREIEEMGRFGGGGGGRGFRGGRGRGRGRGGYGGGGRT
GANSFAVGNSRW
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacggcggatacagcggcggctccggtcgcggtggctcctatggcggtggtcgt
ggcggctacggcggtggctctagcagctacggcaacggtggtagcagttatggtggtggc
tcctcatacggaggtggcagttcgtatggcaacggaggtggcggatacggtggtggatac
ggtggtggctacggcggcggcgaccgcatgagcaacctcggtagcaaccttggcgctgtc
gactggaactctgtcaacctcgttcccttcgagaagaacttttacgtcgaggacccccgt
gtctccaaccgctctgacagcgaggtccaacagtaccgcgcctccaagcagatgaccatt
caaggtcagaacgtgcccaagcccgtcacttcgttcgacgaggccggcttccccgattac
attctctccgaaattaagaagatgggcttcagcgagccctcggccattcagtcccaggcc
tggcccatggctctcagcggtcgtgaccttgtcgccatcgctgagactggttccggtaag
accattggctttgcgctccccgccatggttcacatcaacgctcagccgctcctcaagcct
ggcgatggccccattgccctcattcttgctcccactcgtgagcttgccaaccagatccag
gtggagtgcaaccgcttcggtggctccagccgcctccgaacctgcgccgtctacggtggt
gtccccaagggtcctcagatccgcgacctccagcgtggcgccgagatctgcatcgccacc
cctggtcgtcttatcgacatggtggacgctggcaaaaccaaccttcgacgcgtcacctac
ctggtcatggatgaggctgaccgcatgctcgacatgggtttcgagccacagatccgcaag
attttgcagcagatccgtcccgaccgacagacgctcatgttttccgccacctggcccaag
gaggtgcaacgtcttgcgggcgatttcctcaacaactacgcccaggttaacatcggctcc
accgagcttgccgccaaccacaacgttaagcagatcatcgaggtctgcaccgaattcgaa
aagaagggcaagctcattggtcacctggagaccatctcggccgagaacggcaaggtcatc
atctttactagcaccaagcgtgttgctgatgacctgaccaagttccttcgtcaggacggc
tggcccgcccttgccatccacggtgacaagcagcaacaagaacgtgattgggtactcgcc
gagttcaaatcgggtcgcagccccattatggttgctaccgctgtagcatctcgaggtctc
gacgtcaaggacatttcttatgtcatcaactacgacttccctactaacactgaggactac
gtccaccagattggccgtaccggacgtgccggacgcacaggtacggcgtacacgtacttt
acgccggagaactccaagtcggcgcgagagctgattggcatccttcgcgaggccaagcaa
gagatccctcgtgagattgaggagatgggtcgcttcggtggcggaggcggtggacgtggc
ttccgtggcggtcgcgggcgcggtcgcggccgtggcggctacggcggtggaggacgcacg
ggagccaactcgtttgccgtgggcaattcgaggtggtaa
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