Mycosarcoma maydis: UMAG_10683
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Entry
UMAG_10683 CDS
T01021
Name
(RefSeq) putative ATP-dependent RNA helicase
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
uma
Mycosarcoma maydis
Brite
KEGG Orthology (KO) [BR:
uma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
uma03009
]
UMAG_10683
Enzymes [BR:
uma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
UMAG_10683
Ribosome biogenesis [BR:
uma03009
]
Eukaryotic type
90S particles
Helicases
UMAG_10683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
Utp25_C
Herpes_ori_bp
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
23566678
NCBI-ProteinID:
XP_011391735
UniProt:
A0A0D1DW15
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Position
17:complement(<159079..>160935)
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AA seq
618 aa
AA seq
DB search
MDIFRKLAGGGARFDKKRFQNDLKIFGGAADEQASTLTPSSAASSSNVSGSKRKRTDGSA
VAGNDGKGASGAKVIVPDGLDFFGSAAKTKSTTSAAEREERQSRKDGKRKADEKLGSDMD
DDDEEERHTDEAPVTKASLSGFLKLNKIKLKGTDVPLPMASWSELEARFNVASWLRTNLE
KCGWAVPTAIQKGTMPVLLANRDLLAGAPTGSGKTLAFLLPLIHHLRTPCRKEHFRAVIV
SPTRELAQQIYDQLRRLSEGQNFRICVLTSTSDATAVANSSSADASKRKKYDVLITTPLR
LVHAIEKEQVELSNVRHLVLDEADRLLEDGFLQQTDSILAACSHPQLRKALFSATLPAGV
EEMAKTFMIDECRVIVGTKDSATETIQQELQFVGSEDGKLHALRSLILQGGLKPPVLLFV
QSIERAKDLFHELVYDGLHVDVIHSERPKLQRERVISAFKRGDIWVLICTELMARGIDFK
GVQLVINYDFPQSVQSYIHRIGRTGRAGKQGRAITYFTKEDAPHLKTVVNVMRQSGCEVP
EWMLALKNPGKKDRKSLKNNAPERKHIRTSAASSVGRRQANKRKEMIAASKRRKLAERED
NDKGKAKEKVKSKEQHEA
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggacatttttcgaaagctagctggcggaggcgctcgcttcgacaagaaacgttttcaa
aacgatctcaagatcttcggaggcgccgctgacgagcaagcttccactttgacgccgagc
agcgccgcttcatcgagcaacgtatctggtagtaagaggaagcggacagatgggtctgct
gtagctggaaatgatggaaagggcgcgagtggggctaaggtgattgtgccggacggattg
gacttttttggctcggcggcgaagactaaatctactacgtcggcggctgagcgcgaggaa
aggcagagcaggaaggatgggaagcgcaaagcggacgaaaagctcggttcggatatggat
gatgatgacgaagaagaaaggcatacggatgaagcacctgtgacgaaagcatcgttgagc
ggattcctcaagctaaacaagatcaaactcaaaggaaccgatgtgccactgccgatggcg
tcgtggtcagagctagaagcacgcttcaacgtcgcgtcttggctacgcaccaacctggaa
aagtgcggatgggcggttcctacagcaattcagaagggtaccatgcctgtgctactcgcc
aatcgcgatcttctggccggagcaccaacaggatccggtaaaacactcgcctttctcctg
ccactcatccaccaccttcgtacgccttgcaggaaggagcatttccgagctgtgatcgtc
tcgcccacgcgcgaactcgcacaacagatctacgaccagcttcgtcgcctcagcgaagga
caaaatttccgcatctgcgtactcacctcgacgtctgacgccaccgctgtggccaactcg
tcctcggcggatgcaagcaaacgcaaaaagtacgatgtgctcatcacgacgcctctgcga
ctggttcatgcgatcgaaaaggagcaagtcgagctgagcaacgtgcggcacttggtgctg
gatgaagcagatcggttgttggaagatggattcttgcagcagacagattccatcttggcg
gcatgttcgcatccacaattacgcaaagcgttgttctcagcaacactgccagcgggcgtc
gaagagatggccaagacttttatgatcgacgaatgtcgtgtcatcgtcggcaccaaagat
tcggccaccgaaaccatccaacaggaactgcaattcgtcggttccgaagatggcaagctc
cacgctttgcgatcattgatcctgcagggaggtctcaaacctcctgtgctgctctttgta
cagtcgatcgaacgagcgaaagatctgttccacgagctcgtctacgacggtctacacgtc
gacgtgatccactcggagcgacccaaactgcagcgcgagcgcgtcatcagcgccttcaag
cgtggcgacatatgggtattgatctgcacagaacttatggctcgcggtatcgatttcaag
ggtgttcaactcgtcatcaattacgacttcccgcaatcggtgcagtcgtacatccatcga
atcggccgaacaggaagggcgggcaagcaaggccgagccatcacatactttacaaaagag
gacgctccccatctgaagacggtcgtcaatgtgatgaggcaaagcggatgcgaggtgcca
gagtggatgctcgccttgaagaacccaggcaaaaaggacaggaagagcttgaagaacaac
gcgccagagagaaagcacatcaggacaagcgcagcgagcagtgtgggcaggagacaggcg
aataagcgcaaggagatgatcgctgctagcaagaggagaaagttggcagagcgagaggac
aacgacaagggcaaagccaaggagaaggtcaagtcaaaggagcagcatgaggcgtga
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