Mycosarcoma maydis: UMAG_10902
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Entry
UMAG_10902 CDS
T01021
Name
(RefSeq) hypothetical protein
KO
K12876
RNA-binding protein 8A
Organism
uma
Mycosarcoma maydis
Pathway
uma03013
Nucleocytoplasmic transport
uma03015
mRNA surveillance pathway
uma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
uma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
UMAG_10902
09122 Translation
03013 Nucleocytoplasmic transport
UMAG_10902
03015 mRNA surveillance pathway
UMAG_10902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uma03019
]
UMAG_10902
03041 Spliceosome [BR:
uma03041
]
UMAG_10902
Messenger RNA biogenesis [BR:
uma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
UMAG_10902
Spliceosome [BR:
uma03041
]
Complex C
Other components
EJC/TREX
UMAG_10902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
DUF5689
RRM_3
RRM_7
Motif
Other DBs
NCBI-GeneID:
23566864
NCBI-ProteinID:
XP_011390960
UniProt:
A0A0D1DY57
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All DBs
Position
13:229840..230573
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AA seq
159 aa
AA seq
DB search
MDDDPNIKRRGRGFDPRGNGPASEGVKAGRFDTLDETADSGARAVKSVEGWVIVVTNVHE
EATEEDVTDKFLDYGMVRSCHLNLDRRTGYVKGYALLEFAEQDEAQAAIQACQEGLTLLD
QELKADFAFVKPPAGAVSIRGVASRRVNANRDRSRSPGR
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgacccgaacatcaagcgcagaggaagaggctttgaccctcgtggcaacggt
cccgcgtccgaaggtgtcaaagctggtcgattcgacactctcgatgaaacagccgatagc
ggcgctcgtgcagtcaaatctgtggaaggatgggtaatcgtcgtcacaaacgtacacgaa
gaagctacggaagaagacgtcaccgacaagttcctagactacggcatggtcaggagctgt
catctcaacctcgatcgacgtacgggatatgtcaagggctacgctcttctggagtttgct
gaacaggatgaagcgcaagcagcgatacaggcatgtcaagaagggctcacgctgcttgat
caagagctcaaagcagattttgcgtttgtcaaaccaccagctggagccgtttctatacga
ggagtagcatcgagaagggttaatgcgaacagagatcgcagtcgtagtccaggcaggtga
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