Mycosarcoma maydis: UMAG_11271
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Entry
UMAG_11271 CDS
T01021
Name
(RefSeq) putative AAA family ATPase CDC48
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
uma
Mycosarcoma maydis
Pathway
uma04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
uma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
UMAG_11271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uma03019
]
UMAG_11271
03009 Ribosome biogenesis [BR:
uma03009
]
UMAG_11271
04131 Membrane trafficking [BR:
uma04131
]
UMAG_11271
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
uma04147
]
UMAG_11271
Messenger RNA biogenesis [BR:
uma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
UMAG_11271
Ribosome biogenesis [BR:
uma03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
UMAG_11271
Membrane trafficking [BR:
uma04131
]
SNARE
SNARE associated proteins
Others
UMAG_11271
Autophagy
Aggrephagy
Other aggrephagy associated proteins
UMAG_11271
Exosome [BR:
uma04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
UMAG_11271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_33
AAA_5
AAA_2
TIP49
AAA_22
AAA_14
RNA_helicase
Mg_chelatase
Parvo_NS1
AAA_28
nSTAND3
ATPase
AAA_7
NPHP3_N
AAA_17
IstB_IS21
AAA_lid_PRS2_C
DUF815
AAA_24
AAA_25
AAA_18
ResIII
Sigma54_activat
Vps4_C
ABC_tran
TsaE
SLFN-g3_helicase
PhoH
NB-ARC
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
23567176
NCBI-ProteinID:
XP_011387394
UniProt:
A0A0D1E6E7
LinkDB
All DBs
Position
2:745745..748243
Genome browser
AA seq
832 aa
AA seq
DB search
MSDPAPSNPPKPAPADDKDEVATAILRQRKSPNKVFVEESTTDDNSVACLSAAKMDELGL
FRGDTILLRGKKRRDTVLICLSDENTEDSKIRLNKVARNNLRVKLGDLVSIHACHDIKYG
KRIHVLPFDDSVEGLTGNIFDVYLKPYFLEAYRPVRKGDTFTVRGGMRAVEFKVIETDPA
EFCIVAQDTVIHTEGEPVKREDEEANLADVGYDDIGGCRKQMAQIREMVELPLRHPQLFK
SIGIKPPRGVLMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFE
EAEKNSPAIIFIDEIDSIAPKREKTNGEVERRVVSQLLTLMDGLKARSNIVVMAATNRPN
SIDPALRRFGRFDREVDIGIPDPTGRLEILRIHTKNMKLADDVDLEQIAAETHGYVGSDV
AALCSEAAMQQIREKMDLIDLDEDTIDAEVLDSLGVTMENFRFALGVSNPSALRETVVEV
PTTTWKDIGGLDKVKQELQETVSYPVEHPEKFLKYGMAPSKGVLFYGPPGTGKTLLAKAI
ANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVMFFDELDAIAKSRGSSSG
DGGGAGDRVINQILTEMDGVSSRKNVFIIGATNRPDQIDPAILRPGRLDQLIYIPLPDEP
SRLSILKATLKKSPIAEDVDLTFLAKHTHGFSGADLAEICQRAAKLAIRESIEADIKRER
ERIEKKEANADGEVKMEEDAAAGAAAEEEEDDPVPEITRAHFEEAMRFARRSVSDGDIRR
YELFAQNLQSARSFGTSFRFPEGQNPAQTGGAGGAGGAAFGNDDAGDDDLYA
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaccctgctccttccaatcctcccaagccagcacccgccgatgacaaggatgag
gtcgcaactgccatcctacgtcagcgaaagtcacctaacaaggtgttcgtcgaggagtct
acgacagatgacaactcagtagcgtgtctgtcggccgccaagatggacgaactcggcctc
tttcgcggtgacaccatcttgctcaggggaaagaagcgtagagacacagtgttgatctgc
ctctctgatgaaaataccgaagactccaagattcgcctcaacaaggtagcccgaaacaat
ctccgcgtcaagctcggcgacctcgtctctattcatgcttgccatgacatcaagtacggc
aagcgcattcacgttcttccctttgacgatagcgtcgagggtcttactggaaacatcttt
gacgtctacctcaagccctacttcctcgaggcctaccgtcccgttcgcaagggtgacact
ttcaccgtacgtggtggtatgcgtgctgtcgaattcaaggtcatcgagaccgatcctgcc
gaattctgcattgttgcccaagacacggtaattcacacggagggcgaaccggtcaagcgc
gaagatgaggaggccaacctcgcagatgtcggctacgacgacattggtggttgccgcaaa
cagatggcccagatccgtgagatggtcgagttgcctctacgacacccgcagctattcaaa
tcgatcggtatcaagccgcctcgcggtgtgctcatgtatggtcctccaggtaccggcaag
acgcttatggctcgtgctgtcgccaacgaaacgggtgccttctttttcctcatcaatggt
cccgagatcatgtccaagatggccggagagtccgagtcgaacctgcgaaaggcgtttgag
gaggccgagaagaacagccccgccatcatcttcattgacgagattgacagtattgcaccc
aagcgtgagaaaaccaacggtgaagtcgagcgacgtgtcgtttcacagcttctcaccctc
atggacggtctcaaggcgcgttccaacattgtggtcatggccgccaccaaccgacccaac
tcgatcgatcctgctcttcgacgattcggccgattcgaccgtgaagtcgacattggtatc
cccgaccccactggtcgactcgagattctgcgcattcacaccaagaacatgaagctggcc
gacgacgtcgatctcgagcagattgctgccgagactcacggttacgtcggttcggatgta
gccgccctctgctccgaggctgccatgcagcagattcgtgaaaagatggacctcattgac
cttgacgaggacacaattgatgccgaggtgctagactcgctcggagtcaccatggagaac
ttccgcttcgctctcggcgtctccaacccgtcggctctccgagagacggtggttgaggtg
cccactaccacttggaaggacattggtggtctcgacaaggtcaagcaagagctgcaagag
accgtctcgtaccccgtcgagcatcccgaaaagttcctcaaatacggcatggcgccttcc
aagggtgtcctcttctacggaccgcctggtaccggtaagacgctgcttgccaaggctatt
gccaacgagtgccaagccaactttatttcgatcaagggtcctgagctgctcaccatgtgg
ttcggtgagtcggaggctaacgtgcgagacgttttcgacaaggcgcgtgctgctgctcca
tgtgtcatgttcttcgacgagctggatgccatcgccaagtcacgaggttcgtcatctggc
gatggcggtggagctggtgaccgtgtcattaatcagatccttaccgagatggacggtgtc
agctcgcgtaagaacgtcttcatcattggtgctaccaaccgacctgaccagatcgacccg
gctatcctgcgtcccggccgtctcgaccagctcatctacatccccctccccgacgagcct
tcgcgtctgtcgattctcaaggcgacgctgaagaagtcgcccatcgccgaggatgtcgac
ctcaccttccttgccaagcacacacacggtttctctggtgccgatcttgccgaaatctgt
cagcgtgctgccaagctggctatccgcgagtcgatcgaagccgacatcaagcgcgagcgc
gagcgtattgagaagaaggaggccaatgctgatggtgaggtcaagatggaagaggacgcc
gctgctggtgctgctgctgaggaggaggaggatgaccctgtccctgagatcacccgagct
cactttgaagaggccatgcgcttcgctcgccgatccgtatcggacggtgacattcgccgt
tacgagctgttcgcacagaacctccagtcagcacgctcgtttggtacttcgttccgcttc
cctgagggccagaacccagcgcagactggtggcgctggcggagcaggtggcgctgccttt
ggcaatgacgacgccggcgatgatgacctatacgcttaa
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