Mycosarcoma maydis: UMAG_11308
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Entry
UMAG_11308 CDS
T01021
Name
(RefSeq) histone deacetylase
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
uma
Mycosarcoma maydis
Pathway
uma03082
ATP-dependent chromatin remodeling
uma03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
uma00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
UMAG_11308
03083 Polycomb repressive complex
UMAG_11308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
uma03036
]
UMAG_11308
Enzymes [BR:
uma01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
UMAG_11308
Chromosome and associated proteins [BR:
uma03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
UMAG_11308
HDAC complexes
Sin3A-HDAC complex
UMAG_11308
BRAF-HDAC complex
UMAG_11308
REST complex
UMAG_11308
SHIP complex
UMAG_11308
MiDAC complex
UMAG_11308
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
UMAG_11308
Heterochromatin formation proteins
Other heterochromatin formation proteins
UMAG_11308
Chromatin remodeling factors
NuRD complex
UMAG_11308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
23567208
NCBI-ProteinID:
XP_011387414
UniProt:
A0A0D1CEH3
LinkDB
All DBs
Position
2:1622496..1624253
Genome browser
AA seq
585 aa
AA seq
DB search
MEPAPVFRTPRKRVAYYYDHDVGNFSYGLGHPMKPHRMRMTHNLVTNYGLHKKMDILRPK
RATRDQMTRFHTDEYVDFLHRVTPETVHELTNEGTRYLIGEDCPAFDGLYEFCSISAGGS
LAAATRLNSGESDVAINWAGGLHHAKKREASGFCYVNDIVLAILELLRVHLRVLYIDIDI
HHGDGVEEAFYTTDRVMTASFHKFGDFFPGTGDVRDIGMKKGKNYCVNVPLRDGIGDLEF
GNIFRPIISHIMEWYRPGAVVLQCGADSLAGDKLGCFNLSMRGHAECVAFMQTFDVPLIT
LGGGGYTVRNVARTWTYETGLLVGQKLDEDLPFNDYIQYFGPEYKLEVPPTSMDNLNSRE
YLDNLRTKIIDNLRNLPSAPGVQMQETPRTTLNPADVEMSDGEDSDLDERISQHLRDAHV
QHWDDELSGDEAQVDGERLESVWAMATDRSSGASNGRSRPGIMDPLKPYEHDLGLKYISH
NGVAAAKGKPRAKRTFFAARAAKPGLADLHLDDDDEQDDDEQRHHIASQFGGRRTRAFFA
ANQGSTRLPRDATPLSDVDIGSPALSAAAVASTNGQARSAVNGRR
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggagccggctcccgtctttcgcactccgcgcaagcgggtcgcctactactacgaccat
gacgtcggcaactttagctacggtctcggacatccaatgaagccgcatcgtatgcgcatg
acgcacaatctcgtcaccaactatggtctgcacaaaaagatggacatcctccgtcccaag
cgagccactcgcgaccagatgacgcgcttccacactgatgagtacgtcgactttcttcac
cgcgtcacgcctgaaaccgttcacgagctcaccaacgaaggtactcgctacctcatcggc
gaagattgccctgcttttgacggtctgtacgagttctgttcgatctcagccggcggatcg
cttgctgctgctactcgtctcaattcaggcgaatcggatgtggctatcaattgggcaggc
ggtctgcatcacgccaagaagagagaggcgagtggtttctgctacgtcaacgacatcgtc
cttgccatcctcgagctgctccgagtccacctgcgcgtcctctacatcgacattgacatc
caccacggggacggcgtcgaagaggccttctacaccaccgaccgtgtcatgactgccagc
ttccacaaattcggcgacttcttccccggtaccggtgacgtccgcgatatcgggatgaag
aaaggcaaaaactactgcgtcaacgttccgctccgcgacggtattggcgatctcgagttc
gggaacatcttccgtcccatcatctctcacattatggaatggtatcgtcccggtgccgtg
gttctgcagtgcggcgctgattcgctggcgggcgacaagctgggctgcttcaatctttcc
atgcgcggacatgccgagtgcgtcgcgttcatgcagaccttcgatgtgccacttatcacg
cttggtggaggaggatatacggtgcgcaacgtcgcacgcacatggacctacgagacgggt
ctgctcgttggtcagaagctcgacgaagacctgcccttcaacgactatatccagtacttt
ggccccgaatacaagctcgaggtgccacccacatcgatggacaacctcaactcgcgcgag
tatctcgacaatcttcgcaccaagatcatcgacaacttgcgcaaccttccgtcggcgccc
ggcgtgcagatgcaggagacgccgcgcaccacgctcaatcccgcggatgtcgagatgtcg
gatggcgaggattcggatctggacgagcggatttcgcagcatctacgcgacgcacatgtg
cagcattgggatgacgagctgtctggcgacgaagctcaggtggatggtgagcgtttggaa
tccgtttgggccatggcgacggatagaagcagtggcgcatcgaatggcaggagtcgaccg
ggcatcatggatccattgaagccttacgagcacgatttgggtctcaagtacatctcgcac
aatggcgtagcagcagccaaaggtaagccaagagcgaaacgcacattcttcgctgcacga
gctgccaaacctggcctcgccgatctgcatctagacgatgacgacgagcaagacgacgac
gagcaacgtcaccacattgcgagtcagttcgggggcaggcgtaccagggcgtttttcgca
gcgaatcaaggcagcacgcgtttgccacgcgatgctacgcccttgagtgacgttgacatt
ggctcgcctgctttgtccgctgccgccgtcgcttccaccaacggtcaagctcgaagtgct
gtcaacggtcgcaggtag
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