KEGG   Mycosarcoma maydis: UMAG_11620
Entry
UMAG_11620        CDS       T01021                                 
Name
(RefSeq) hypothetical protein
  KO
K07573  exosome complex component CSL4
Organism
uma  Mycosarcoma maydis
Pathway
uma03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:uma00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    UMAG_11620
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:uma03019]
    UMAG_11620
Messenger RNA biogenesis [BR:uma03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     UMAG_11620
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     UMAG_11620
SSDB
Motif
Pfam: EXOSC1 ECR1_N
Other DBs
NCBI-GeneID: 23567482
NCBI-ProteinID: XP_011386796
UniProt: A0A0D1EAK6
LinkDB
Position
1:2023037..2023819
AA seq 260 aa
MTAPTSSSGRLLLPGQPVSVSRSSKPQLELGLGTYARGDYILSSLVGYESRTLSGSSSSS
SSTLPNQTTKSKTGLAQTEIVSISGVENRFVVPRPDSTVIARVTRVTPRQAYLSILIVDG
QPCGSSSSTSSTFVQSGLGNHAAGEGEGVDFQGVVRSQDVRSTEKDKVKIADCFRPGDIV
RATVISLGDARSYYLSTAGNSLGVIYATSATSAGAQLSDTPGGAGWNITGNPMLPISWNQ
MIDPITGILENRKCAKPDSI
NT seq 783 nt   +upstreamnt  +downstreamnt
atgactgctccgacctcatcgtcaggtaggctcttgcttccaggccaaccggtgtccgtc
tcacgctcctctaagccgcagcttgaacttgggctcggcacatacgcacgaggtgactac
atcctctcctcactggtcggttacgaatcacgcacactgtctggctcgtcatcgtcttcc
tcttcgacattaccgaatcagacgactaagtcaaaaactgggcttgctcagacggagatc
gtgtctatcagcggcgtagaaaatcggttcgttgtaccgcgacctgattcaaccgtgatt
gcgcgagtgacgcgcgtcaccccgcgccaggcgtacctgtcgatcctgatcgtcgacgga
caaccgtgtggatcttcgtcctcaacatcatccaccttcgtccagtccggtctgggcaac
catgcagcgggcgaaggcgaaggcgtcgactttcaaggcgtagttcgatcgcaagacgta
agaagcaccgaaaaggacaaagtgaaaatcgccgattgcttccgtccaggcgacattgtc
cgtgccaccgtaatcagtctgggcgatgctagaagctactacttgtccaccgccggaaac
agtctaggtgtcatctatgccacgagcgcaacttcagcaggtgcccaactctccgacaca
ccaggtggcgcaggctggaacatcaccggcaatcccatgctacccataagctggaaccag
atgatcgatcccatcaccggcatcctcgaaaaccgaaagtgcgctaaacctgattcgatc
tga

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