Mycosarcoma maydis: UMAG_11761
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Entry
UMAG_11761 CDS
T01021
Name
(RefSeq) hypothetical protein
KO
K03679
exosome complex component RRP4
Organism
uma
Mycosarcoma maydis
Pathway
uma03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
uma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UMAG_11761
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uma03019
]
UMAG_11761
Messenger RNA biogenesis [BR:
uma03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
UMAG_11761
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
UMAG_11761
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
23567610
NCBI-ProteinID:
XP_011391002
UniProt:
A0A0D1CLK3
LinkDB
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Position
13:complement(557110..558315)
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AA seq
401 aa
AA seq
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MSGADALPAFVIHATSSRPSTWNSKTTLSQRRLEGCNTPSRLVHYSGETHPASSSWRLSR
YAPTFTKDDMDVEHDEMDADDGEMGDVRIAVTGGSIASSHVFMKGHGTFLSADTDEILSS
MCGTVERVNKLISVRPARSRYAAEVGDLVIGRITEVGPKRWKVDINAKTDSALQLSSINL
PGGIQRRKIESDELQMRSFFQENDLLVAEVQMMFQDNSSALHTRSLRYGKLRNGILVTVS
PNLIQRLKSHFVHLKHDELQLDVDLVIGLNGYIWIAKHFAYTQPSNSSTTATAPASASAA
DQTGLAGSGIGMDIDATYSDQNDADLSISLRRQIQRVAKCIHILNTYHHPISDTSILDLI
HISVVYIGPILQHQEQQDWHKLPSLTSLMVQQLQSASSLTS
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgtctggagcagacgcattgccggcgtttgtgattcacgccaccagctcacggccatcg
acatggaacagcaagacaacattatcgcagcgtcgattggaaggatgcaatacgccatcg
cggctggtgcactactcgggagaaacacatccggcatcgtcgtcttggcgtctttctcgc
tacgctccaacgttcacaaaggatgatatggatgtggaacacgacgagatggatgcagac
gatggtgagatgggagatgtacgaattgcggtgactggtggcagcattgcgtcttcgcat
gtgtttatgaagggtcacggtacgtttttgtcagcggacacggacgagattctgtcttcg
atgtgtgggacggtggaacgcgtcaacaagctgatatctgtgcgcccggcgcgctcgcgg
tatgcggctgaagtgggagatctggtgatcggtcggatcaccgaagtgggtccgaaacgc
tggaaggtcgatatcaacgctaagaccgactctgcacttcaactgtcgtcgatcaatctt
cctggggggattcaacgccgaaagatcgagagtgacgagttgcagatgcgaagttttttc
caggaaaacgacctactggttgccgaagtgcaaatgatgtttcaggacaactcgtcggct
ctgcacacacgttcgcttcgctatggcaagctgaggaacggcatcctggtcactgtttct
ccaaacctgatccaacgtctgaaatctcactttgtccatctcaagcacgacgagttgcag
ctggacgtcgacctcgtcatcggcctcaacggctacatctggatcgccaagcactttgcc
tacactcagccgtccaactcgtccacaaccgcaactgcccctgcctctgcatctgcagcc
gatcaaacaggcctcgcaggctccggaatcggcatggacatcgatgccacctactcggac
caaaacgacgcggacctctcaatcagcctccgtcgtcagatccaacgcgtcgcaaagtgc
atccacatcctcaacacctaccaccaccccatctccgacacctcgatcctcgacctcatc
cacatctcagtcgtctacatcggccccatcctccagcaccaagaacagcaagactggcac
aagctccccagtctcacctcgctcatggtccaacagctgcaatccgcatcatccctcaca
agctag
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