Mycosarcoma maydis: UMAG_11913
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Entry
UMAG_11913 CDS
T01021
Name
(RefSeq) hypothetical protein
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
uma
Mycosarcoma maydis
Brite
KEGG Orthology (KO) [BR:
uma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
uma03041
]
UMAG_11913
Enzymes [BR:
uma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
UMAG_11913
Spliceosome [BR:
uma03041
]
Complex C
Other components
Complex C specific factors
UMAG_11913
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
OB_NTP_bind
HA2_C
DEAD
AAA_22
AAA_19
ResIII
Cas3-like_C_2
AAA_30
nSTAND3
T2SSE
Herpes_ori_bp
Motif
Other DBs
NCBI-GeneID:
23567724
NCBI-ProteinID:
XP_011388893
UniProt:
A0A0D1CSP8
LinkDB
All DBs
Position
5:complement(164564..166741)
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AA seq
725 aa
AA seq
DB search
MSATAPKPVFWKPGSARPGSSLDRSSESSSLLVTSSPSSHSSSLPIHSARLSILYALETH
QILIVVAATGSGKTTQLPQILYHAGYTSTSGIIACTQPRRLSAISIASRVSSELNTRLGT
TVGYTIRFEDNSSAETRIKYMTAGALLRECIRDPLLTRYSVIIVDEAHERQVQSDLLLGV
LKKILRKRRELRVVVSSATIDALAFKRFFEHDIGGSGSAGDEPEEKVAVLQLDGASTFPV
EIAYLKQPCDDWMLETIETIWRIHLAEPQGDILAFVTARHEIDLALQHLSDRQLDLPPSA
LKMNLLALHAGLSMDEQNAIFARPLSPHTTRKVVIATNIAEASITLDGIVYVVDCGLVKV
RSAGSHGSCVDSLWLEPISRASATQRAGRAGRTAAGKCFRLYTEEYFLTSMRETTLPELY
RVDLSATVLLLKSLGIDDLVKFDWLPPAPRVTSLASALSSLHSLRALDDHARLTIVGAWM
GELPLAPHLARILIASAQPEFACAQEMLSILAMLTVTDPFFARDSVETQLSVRNFAAQEG
DFLTLLNILTGFMQNGSSKKWATKNRLAFTVLHRALNIRSQLSRFLVRFSSHPLGITLNP
TSSVLDHPTARESITKCLCTGLYANLARYNAATMSYTSTSAHQLHVHPSSVLFNRQPQQG
KFWIIFSHAEQHHSAQQDKVYIRDLGVLDELEWLTDSVPGAYTVETRCGRDAQTRLPTSN
NRESP
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccacagcaccaaaaccggtcttctggaaacccggctcagcacgtcctggtagc
tcgctggaccgatcgtccgaatcctcgtcgctactcgtcacctcgtcgccctcttcgcat
tcgtcttcgctgccgatccactctgcgcgactatctatcttatacgcactagaaacccac
cagatccttatcgtcgtcgcggccaccggctccgggaaaaccacccaactaccccagatc
ctttatcatgccggctacacatccacctctggcattatcgcctgcacacaacctcgtcga
ctctcagccatcagcatcgcttcacgtgtctcgtccgaactcaacacacgcctaggcacc
acggtcggctatacgatccgattcgaagataactcgtctgccgaaactaggatcaagtac
atgacagcaggtgcactgcttcgagagtgtatacgagacccgcttttgacgaggtacagc
gtgataatcgtggacgaagcacatgagaggcaagtgcagagcgatttgttgctgggcgtc
ttgaagaaaattttgcgaaagaggcgtgagttgagggtggtagtgagtagtgcaacaatc
gatgcgctcgctttcaagcgttttttcgagcatgacattggcggaagcggtagcgctgga
gacgaaccggaagaaaaagtggccgtgttgcagctggatggagccagcacatttccggtc
gagatagcctatctgaagcaaccttgcgatgattggatgctggaaacgatcgaaacaata
tggcgaatccacctggccgaaccgcaaggtgacatcctagccttcgtcacggcaagacac
gagatcgacttggcactccaacacctttccgaccgacaactcgatctgccaccttcggct
ctcaagatgaatttacttgcgctgcacgcagggctctccatggacgaacaaaacgccatc
tttgcacgccctctgtcgcctcacacgacgcgcaaagtggtgattgcgaccaacatcgcc
gaagctagtatcacactcgacggtatcgtctacgtcgttgactgtgggcttgtcaaggtc
cggagcgcgggctcgcatgggtcttgtgtggactctttatggctcgaaccgatcagtcga
gcgagtgcgacgcaacgcgccggtcgagctggtcggacagccgcaggcaagtgttttaga
ctgtacactgaggagtacttcctcacgtcgatgcgcgaaacgacgctaccagagttgtat
cgagtcgatctttcggcgactgtgctgctgttgaaatcgttggggatcgacgatctggtc
aaattcgactggctgccacctgcgccgcgcgtcacgtcgcttgcatccgctctatccagt
ctgcactcgttaagagctctggacgaccacgctcgactcactatagtcggagcgtggatg
ggcgagctacctctggctccacatctagcgcgtatactgatcgcttctgcgcagccggaa
ttcgcatgtgctcaagaaatgctctcgatcctagccatgctgactgtcaccgatccattc
ttcgcacgcgattctgtcgagacgcagctgagcgtgcgaaactttgctgcacaagaaggc
gactttctcacgctgctcaacatcctcactggcttcatgcagaacggaagcagcaagaaa
tgggccaccaaaaacaggctagcattcaccgtgttacatcgtgcactcaacatccgatcg
caactgtcgcgcttcctcgtccgtttttcctcgcatccgctcggaatcacgttgaaccct
acgtcgtccgtcttagaccaccccacagcacgagaatccatcacaaaatgcctctgcaca
ggcctctacgcaaacctagcaagatacaacgctgccaccatgtcctacacgtccacctcg
gcacaccaactacacgtccacccttccagcgtccttttcaacagacaaccccaacagggc
aagttctggatcatcttctctcacgccgaacaacaccatagtgcacagcaagacaaagtg
tacataagagatctcggcgtattggacgagctcgaatggctgactgacagcgtacctggt
gcatacacggtcgaaactagatgcggtcgagatgcacagactcgcctacctaccagcaac
aatcgagagtccccgtag
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