Mycosarcoma maydis: UMAG_15102
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Entry
UMAG_15102 CDS
T01021
Name
(RefSeq) hypothetical protein
KO
K14311
nuclear pore complex protein Nup188
Organism
uma
Mycosarcoma maydis
Pathway
uma03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
uma00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
UMAG_15102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uma03019
]
UMAG_15102
Messenger RNA biogenesis [BR:
uma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
UMAG_15102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Arm
Motif
Other DBs
NCBI-GeneID:
23568186
NCBI-ProteinID:
XP_011392527
UniProt:
A0A0D1BVD0
LinkDB
All DBs
Position
21:338768..344835
Genome browser
AA seq
1988 aa
AA seq
DB search
MVQATSQSDPSTSHASTSKAGVASSSDLFVSYQDIFEHLELARHQRDTETIRSILSARKD
NLKSCLQPFPILSAPQFDSFSSSSQATPPTTLKLSDGSVHTPTEQTRQLCEAIVEQYHIS
HEDAFVGRRQANSGFFDNEALETVECISSLLVLIAVETLSLEEVMDGLDMLQGSDSHISK
HPQSLELALDLLSNTSADPLHAPILLAWALVLHRLEDALAAQYDASDLDPSHQLPDSTSQ
LADVIRTDDGGPPLWRRLAQAAFAPELRLFDTLMSLLASPLLTSSNGASTPAVAGPSALA
YRAVFKGLLLSITELVKPEFLPDFNTLVSLWEATFGSGVALQLSQTAIDGVAALCDQFWL
VDSRYESRCTTLDTARRRWPVSFRPLILLTRALSGHARVDAQASWPSLLDGRSRPEAEER
ACAAVFDYLANVPTFAQVLPVGANTPNAPFETMEGGDYTSVTYRITRTMHIPGTQVRFSP
GTTGSTISELGKEPVIVLWSPTRPISAWKLMRDILSSFPPAFAELGAAFKDVDPFRDQKQ
SVSFAQIAPADSNEAWEELASDVLDLFASIISASADLAWTLLAHLDGRDINADEISLDYE
PEELEHIQKEKEELANAKSLSSIAVSLLSHALVAAPINIRLVRSSLRLLTVLLPYDPDVV
WQEVRSSNALIGSPGAIPYLSKGTAAAGLPTVSVLLNQEMARASYGGLISLLDFHISLFS
ELRRSYSTSSTDALETKASVLLRTFNWIFECVWPEYQSWRYVQLAERLEIGTKCTRLLHM
ALEERSWRLSPTPTSTLVDEPGPAALLVEAAERSLVGNPSIVGIAPMITCIGTGQQLLDA
LSRAGRQTDAVLAEEWILSTLRLAALIVSRKREGTLAALHDLSTLPAETARKAVSARINM
GLFERLFFDHTIVASRTAFGGGRRSNRVELASATFAYVLFPTSTAISSEAAHLVTSVLRS
ANDLASSGKQIPGLIGHMGTLEELEETLSGLVDLVANSNQHSALKVQVWTMLAAIVDTQP
ALGTLLLTGRHLAMTTETRLNRSEGESESKPTEPAASAPASYRSSNGRALDKTALDVASE
AVLAWRAAYDGASQLLESVLRFLDVAWVHAAEHVAAFDTIRTNSAFFRALADVICEATEI
PTTLAERFIDSEPALHASNDADVSAYCYRKMCQARSLRLLQHDIQLGGILKNRNKSDASS
KASLEALLDILASSDRTLKSIEKSFSMPCDPLMRATLELKLAEIFPTIHVESLRHPSRKD
DFDLDKCYGDNYHFSVSAFRNKAEGRVLDGELGGEVALIEEGLLAIFTINMEWSLIDVQN
YLLQAWTQCIEVCMGRIVAQALNKNSMSALETSAITSWTRLATLAADEGREGDFMRGVHA
TRLGLLTKLMELSWGHRRSKESSTTDQIVQAATLCGRLVTHPFFRVEDSLKATVPPEFHR
DVFEMVLVCVARIRALLSSKGSMVRPNEETIESHKALHASVELFCRHVTDALRIKIEDAL
RSLQISQQRQVNLQVLEDDLDILVSIFEMTIRRDVGAETAVWLAHVQETQLLQTALRLLG
RAPVLRPESINGANTPVNPNSAHHVAFMKPLLSLLVAIASQPSSSEELALQGTVNVLASN
MLTDSLEDGQISPLLLSGDPSASHECWRLMLRVLVNLIDNLGAGSDSPNWRGVSARFVET
DVYGFVRVYQKQIDRAMNLNELHARLASMSGVLSHPSSIHDRFGDGNVGAAVSLEQLEEI
ELISTLLYSLTHIEGEQCWHSHGARSERDVAVPSIVQHLAVTSAGTVQPLVHLLQHPNEL
TSLLGLDPAAAEATNVVQDAAATKIRTIVCVLIASLWNYTSCALVLCRGSDAWPSTESGR
AIVRPTTRTSTVRIATLGTLLDLSTHLTDYIRTNKQKLTAEDKGRFSATLEQALGLAATQ
AAIWAAGRSKDHTEPARLEHMARQELESGLSRDIVSALRAAEEVVGAQGNLFSLITTFVE
SKLNSSRF
NT seq
5967 nt
NT seq
+upstream
nt +downstream
nt
atggtgcaggcaacttcccagtcagacccgtctacgagccatgcttccacatccaaagcc
ggcgttgcttcctcgtccgacctctttgtctcttatcaagacatctttgagcaccttgag
cttgcgcgccatcaacgtgacacagaaaccatccgatccattctttcagcacgcaaagac
aacctcaaatcttgtcttcagccctttcccatcctctcagctcctcaatttgactccttc
tcctcctcctcgcaagctacgcctcctactacgctcaagctttccgatggctcggtccat
acgccaacagaacaaacacggcagctctgcgaagccattgtcgaacagtaccatatctcg
cacgaagacgccttcgtcggtcgacgtcaggccaattcgggcttcttcgacaacgaagcc
ctagaaaccgtcgagtgcatctccagtctgctcgtcctcattgctgtcgagacactctcg
ctcgaagaggtcatggatggtttggatatgcttcagggctccgattctcacatctcgaaa
cacccacaaagtctcgaactggccctcgacctcctcagcaacacctctgccgatcccttg
catgcacccatcctcctcgcctgggcactcgtcctccaccgtctcgaagatgccctagca
gctcagtatgatgcctccgacctcgacccttcccaccaacttcccgactccacatctcaa
cttgcagatgtcatcagaaccgacgacggtggtccgcctttgtggaggaggttggctcaa
gccgcttttgctcccgaactccgcctctttgacaccctcatgtctctgcttgcctcgccc
ttgttgaccagcagtaatggtgcaagcacccccgctgtggccggtccatcggctctagcc
taccgcgccgtcttcaagggccttttgctcagcataaccgagctcgtcaagcccgaattc
ctccccgatttcaacacccttgtcagtctttgggaggccacttttggctctggcgtcgct
cttcagctcagtcagaccgccattgatggcgtcgccgccctctgcgaccaattctggctc
gtcgacagcaggtatgagtccaggtgcacaactctggataccgcccgacgtcgatggccc
gttagcttccgtcccttgatcctgctcacaagggctctctctggtcacgccagggttgat
gcacaagcatcttggccctccctactcgacggccgctcccgtccggaggccgaagagcga
gcctgcgctgctgtctttgactatcttgctaacgtgccaacattcgcacaggtcctccct
gtgggcgccaacacgcccaatgcgccctttgagaccatggaaggaggagactatacctcg
gttacttatcgaatcacccgtaccatgcatatcccaggtactcaggtccgcttctcgcct
ggaaccaccggttccacaatttcggagctcggaaaagagcctgtcatcgtcctctggagt
ccaacgcgtcctatcagcgcatggaagctcatgcgagacattctctcttccttcccgccg
gctttcgcggagctcggtgctgctttcaaggatgtcgaccccttccgcgatcagaaacag
tctgtcagcttcgcccagatcgctcctgcggattccaacgaggcctgggaagagcttgcg
tctgacgtgcttgatctcttcgccagcatcatttctgcaagcgcagatctcgcctggacc
ctgcttgctcatctcgacggtcgcgacattaatgctgacgagatctcccttgattacgag
cccgaggagctcgaacatatccaaaaggagaaggaagagctcgcaaacgcaaagagcctc
tcctccatagccgtcagcctgctatcacatgcacttgttgcggctcccatcaacattcgc
cttgttcgatcatctcttcgcctacttaccgtgcttctgccatacgatcctgatgtggtg
tggcaggaagtgcgatcatccaacgccctcatcggaagcccaggcgctattccttacctg
tccaagggtaccgccgcagcaggcttgcctaccgtatcagtcttgctgaatcaggaaatg
gcacgtgcttcctacggtggtctcatctcgttgctcgacttccacatatccctgttttca
gagctacgcaggtcatactccacctcttctacagatgctctcgagaccaaagccagcgtt
ctccttcgtaccttcaattggatcttcgaatgcgtttggcccgaatatcaaagctggcga
tatgtgcaattggcagaacggctcgagatcggcaccaagtgcactcgactcctccatatg
gctctcgaagagcgcagctggcgcctctcaccgacaccaacttcaactctggtcgatgag
cctggaccggcagctcttctcgtcgaagccgccgagaggagcttggtaggaaatcccagc
atcgttggcattgcacctatgatcacgtgcattggaacaggccagcagttgctcgacgcc
ttgagcagggctggcagacagaccgatgccgtcttggcagaagaatggatcctatcaacc
ctgcgtctcgccgcgctcattgtctctcgcaagcgcgagggcactcttgccgccctccac
gatttatcgacgctgcctgcagagacggccaggaaggccgtgtcagcgcggatcaatatg
ggccttttcgaacgactctttttcgaccacaccattgtcgcctctcgaaccgcatttggc
ggcggacgcagatcgaatcgagtcgagctggcaagtgccacttttgcctatgtgcttttc
ccgacttccactgccatcagctccgaggcggcacacctcgtcacttccgttttgaggtcc
gcaaacgatcttgcctcatcaggcaagcagatccccggcctcatcggccacatgggcact
ctagaagagctcgaggaaacgctttccgggttggtcgacctcgttgccaattcaaaccag
cattccgccctcaaggtacaggtgtggacaatgcttgctgccatcgtcgatacccagcca
gccctcgggacgctcctcttgaccggccgccaccttgccatgacgaccgaaacccgcctc
aacaggtccgaaggtgaatcggaatccaagccgactgagcctgccgcatctgcacccgcc
tcgtacaggtccagtaacggtcgggcactcgataaaacagcactcgatgtcgcttccgag
gctgtccttgcctggcgagcagcttacgacggcgcatcacagctgctcgaaagtgtcctc
cgcttcctcgatgttgcttgggtgcatgcggctgaacacgtcgctgcatttgatacgatc
cgcacaaactcggcattcttccgcgccttggctgacgtaatttgcgaagcgaccgagatt
ccaacaacattggccgaaagatttattgattctgagccggctttgcatgctagcaacgat
gccgacgtgtctgcttactgctaccggaagatgtgccaggcacgctcgcttcgacttctt
cagcatgacatccagctcggtgggattctcaagaatcggaacaaaagcgatgcatctagc
aaggctagtcttgaagcgttgctcgacatcctcgcctcgtcggaccgcacgctcaaatcg
atcgaaaagagcttctcgatgccttgcgatccattgatgcgcgcgaccttggaactaaag
ctggcagaaatctttcctaccatacatgtcgagtccctgcgccatccgtcgcgtaaagat
gactttgacctcgacaaatgttacggtgacaactaccactttagcgtctctgctttccga
aacaaagccgaaggccgtgtcctcgatggcgagctcggtggcgaggtggcgctgattgaa
gagggcctccttgccatcttcaccatcaacatggagtggagtctgatcgacgtgcaaaac
tacttgcttcaggcatggacgcaatgcatcgaagtgtgcatgggccgcattgttgcgcag
gcactcaacaagaacagcatgtctgcactggagacatccgccatcacaagttggacccgg
ctcgccacgctagctgctgacgagggccgcgagggcgacttcatgcgcggcgtccatgct
acccgacttggtcttctcaccaagctcatggaactttcctggggccaccgccgcagcaag
gaatcgtcgactaccgatcagatcgtccaagctgccactctgtgcggacgccttgtgaca
caccccttcttccgtgtcgaagacagcctcaaagcgaccgtaccgcccgagttccaccgc
gatgtattcgaaatggtccttgtatgtgtcgctcgtattcgtgccttgttgtcctcgaaa
ggctccatggttcgtccgaacgaagagacaatcgagagccacaaagcgcttcatgcatct
gtcgaactcttctgtcgccacgttacagacgctctccgcatcaagatcgaggacgcgctt
cggagtttgcagatttctcagcaacgccaagtaaatctacaggtgttggaggacgacctt
gacatcctcgtgagcatcttcgagatgacgatccgacgcgacgtaggcgctgagacggcg
gtgtggttggctcacgtccaagagacgcagctgctacagaccgcccttcgtctcctggga
cgagcaccagtgctgcgaccggaaagcatcaatggtgccaatacgcctgtcaacccaaac
agcgctcaccatgtcgctttcatgaaaccgttgctctcgctgcttgtggctattgcatca
caaccctcttcgagcgaggaacttgccctgcaaggtaccgtcaatgtattggcctccaat
atgcttaccgattctctcgaggatggccagatctcgcctttgttgctctctggtgatccg
agtgcgtctcatgagtgctggagattgatgctacgtgtccttgtcaatctgatcgacaat
ctgggagccggatccgactccccgaactggagaggcgtcagcgccaggtttgtggaaacg
gatgtctatgggtttgttcgcgtctaccaaaaacagattgatcgggcgatgaacctcaac
gagctgcacgcacgacttgcttcgatgtcaggcgtcttgagccacccatcgtccatccat
gaccgctttggcgacgggaatgtcggcgctgctgtcagtctagaacaactggaggagatt
gagctgatatcgactcttctgtacagcttgacacatatcgaaggcgagcagtgttggcac
tcgcatggtgcacgatccgagcgcgatgtagcggttccttccatcgtgcaacatctcgct
gtgacttcggcagggacggtgcagccccttgtgcacctcttgcaacatccgaacgagctt
acgagtctgctcggcttggacccggcagcagcagaagccacgaatgttgtgcaagatgcg
gcagcgaccaagattcgcacgattgtatgcgtgctgatcgccagcctgtggaattatact
tcttgcgcgttggtgttgtgtcgaggctcggacgcttggccgtcgaccgagtctggacgc
gcaattgtgcggccgacgacgcgaaccagcactgtgcgcattgctacgctcggcacgctt
ctggacctcagcactcatctgaccgactacattaggaccaataagcagaagctgacagcc
gaggataagggacgcttctcggcaacacttgaacaggcgctgggcctagcggcaactcag
gcagccatctgggcagctggaaggtccaaggatcatacagagccggcaaggctggagcac
atggcgcggcaagagctcgagtcgggtctttcgagggatatcgtgtctgcattgagggca
gccgaagaagttgttggcgcgcaagggaatttattctcattgatcacgacatttgtagag
tcgaaactgaacagctcgcgcttttga
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integrated database retrieval system
