Umezawaea sp. Da 62-37: RM788_05410
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Entry
RM788_05410 CDS
T09853
Name
(GenBank) right-handed parallel beta-helix repeat-containing protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ume
Umezawaea sp. Da 62-37
Pathway
ume00040
Pentose and glucuronate interconversions
ume01100
Metabolic pathways
ume02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ume00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
RM788_05410
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RM788_05410
Enzymes [BR:
ume01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
RM788_05410
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
WNV87729
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Position
1303710..1304702
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AA seq
330 aa
AA seq
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MSPINRRRLIAGAALTAFAATAPRAAWADPDADAVADGFAGVTALGQNGTTGGAGGQAVT
VTTAQALRDYVGRKEPYVISVSGRIEVDDMLTVVANKTIFGIGSTAEITGGGLQLGSTTR
PGNNVIIRNLRFTDASDDSISVTNSAHHVWIDHCDLSRGFDGLLDIKRESDYVTVSWNHF
HDHSKTALLGHSDTYTADRGKLRVTYHHNFFDRTDQRHPRVRFGEPVHVYNNYYRGNSLY
GVASTEDAGVLVEANYFENVAYPVLSGYDKSGPGRVVERGNVYVGSGTPQTLGTVVEPRT
YYAYSLDNAADVPALVTAGAGVGRVQRRTS
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgagccccatcaaccgacggcggctgatcgcgggcgcggcgctgaccgccttcgccgcc
accgcgccgcgcgccgcgtgggccgacccggacgccgacgccgtggccgacggcttcgcg
ggcgtgaccgcgctgggccagaacgggaccaccggcggcgcgggcggccaagccgtcacc
gtgacgaccgcgcaggcgctgcgggactacgtcgggcgcaaggagccctacgtcatctcg
gtgtccggccgcatcgaggtggacgacatgctgaccgtcgtcgcgaacaagacgatcttc
gggatcggttccaccgccgagatcaccggcggcgggctgcaactgggttcgaccacccgc
cccggcaacaacgtgatcatccgcaacctgcgcttcaccgacgcctcggacgactccatc
agcgtcaccaattccgcgcaccacgtgtggatcgaccactgcgacctgtcgcgcggcttc
gacggtctgctcgacatcaagcgggagtccgactacgtcacggtgtcgtggaaccacttc
cacgaccacagcaagaccgcgctgctgggccactccgacacctacaccgccgaccgcggc
aagctgcgcgtcacctaccaccacaacttcttcgaccgcaccgaccagcggcacccgcgc
gtgcggttcggcgagcccgtccacgtctacaacaactactaccgcggcaactccctctac
ggcgtcgcgtccacggaggacgccggggtgctggtcgaggccaactacttcgagaacgtc
gcctacccggtgctgtccggctacgacaagagcggaccgggccgcgtcgtggagcgcggc
aacgtctacgtcggctccggtaccccgcagacactcggcaccgtggtcgaaccccgcacc
tactacgcctactcgctcgacaacgccgccgacgtaccagcgctcgtcaccgcgggcgcg
ggcgtcggccgagtccaacggaggacttcatga
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