Umezawaea sp. Da 62-37: RM788_10160
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Entry
RM788_10160 CDS
T09853
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
ume
Umezawaea sp. Da 62-37
Brite
KEGG Orthology (KO) [BR:
ume00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ume03051
]
RM788_10160 (pafA)
Enzymes [BR:
ume01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
RM788_10160 (pafA)
Proteasome [BR:
ume03051
]
Prokaryotic proteasome
Bacterial regulatory particles
RM788_10160 (pafA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
WNV88636
LinkDB
All DBs
Position
complement(2350589..2351947)
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AA seq
452 aa
AA seq
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MQRRIFGIETEFGVTCTFHGQRRLSPDEVARYLFRRVVSWGRSSNVFLRNGSRLYLDVGS
HPEYATAECDDLAQLVTHDKAGERILEDLLVDAERRLADEGIGGDIFLFKNNTDSAGNSY
GCHENYLVARAGEFSRIADVLLPFLVTRQLICGAGKVLQTPRGAVFCLSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAERYRRLHVIVGDSNMSEVTTLLKVGSANLVLEMIEQGVQF
RDFSLDNPIRAIREISHDLTGRRTVRLAGGKEASALDIQREYYERAVEHVAKRSPDPMAE
RVLELWGRTLDAIEAEDLSKIDREIDWAIKHRLMQRYQAKHDMDLSNPRIAQIDLAYHDI
RRGRGIFDLLQRKGQVERVTDDGEIEAAKDTPPQTTRAKLRGDFIAAAQAAGRDFTVDWV
HLKLNDQAQRTVLCKDPFRAVDERVERLIASL
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcagcggcggatcttcggcattgagactgagttcggggtgacctgcaccttccacggg
cagcgcaggctgtccccggatgaggtcgcgcggtatctgttccgccgggtcgtgtcgtgg
gggcgttcgtcgaacgtcttcctgcgcaacggctcccggctgtacctggacgtgggctcc
cacccggagtacgcgacggccgagtgcgacgacctggcccagctcgtcacccacgacaag
gcgggggagcggatcctcgaggacctgctcgtcgacgccgaacgcaggctcgccgacgag
ggcatcggcggggacatcttcctgttcaagaacaacaccgactcggcgggcaactcctac
ggctgccacgagaactacctggtcgcccgcgcgggggagttctcccgcatcgcggacgtc
ctgctgccgttcctggtgacccgccagctcatctgcggagcggggaaggtcctccagact
ccccgcggagccgtgttctgcctctcgcagcgggccgagcacatctgggagggggtctcc
agcgcgacgacccgctcccggccgatcatcaatacccgcgacgagccgcacgccgacgcc
gagcgctaccgcaggctccacgtcatcgtcggcgactccaacatgtccgaggtcacgacc
ctgctcaaggtgggcagcgcgaacctcgtgctcgagatgatcgagcagggggtgcagttc
cgggacttctccctggacaacccgataagggccatccgcgagatcagccacgacctcacc
ggtcgtcgcaccgtccggctcgcgggcggcaaggaggcctcggcgctggacatccagcgc
gagtactacgagcgggccgtcgaacacgtcgccaagcgctccccggacccgatggccgag
cgcgtgctcgagctgtggggccgcacgctcgacgcgatcgaggccgaggacctgtccaag
atcgaccgcgagatcgactgggccatcaagcaccggctgatgcagcgctaccaggccaag
cacgacatggacctgtccaacccgcgcatcgcgcagatcgacctcgcctaccacgacatc
cggcgcggccgggggatcttcgacctcctccagcgcaagggccaggtggagcgggtcacc
gacgacggcgagatcgaggccgccaaggacaccccgccgcagaccacgcgggccaagctg
cgcggagacttcatcgccgccgcgcaggccgccggtcgcgacttcaccgtcgactgggtg
cacctgaagctgaacgaccaggcgcagcgcaccgtgctgtgcaaggacccgttccgcgcg
gtcgacgagcgggtcgaacggctcatcgcctcgctctag
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