Umezawaea sp. Da 62-37: RM788_13800
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Entry
RM788_13800 CDS
T09853
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
ume
Umezawaea sp. Da 62-37
Pathway
ume00260
Glycine, serine and threonine metabolism
ume00630
Glyoxylate and dicarboxylate metabolism
ume00670
One carbon pool by folate
ume00785
Lipoic acid metabolism
ume01100
Metabolic pathways
ume01110
Biosynthesis of secondary metabolites
ume01200
Carbon metabolism
Module
ume_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
ume00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RM788_13800 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RM788_13800 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
RM788_13800 (gcvP)
00670 One carbon pool by folate
RM788_13800 (gcvP)
Enzymes [BR:
ume01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
RM788_13800 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
WNV89331
UniProt:
A0AA96R555
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All DBs
Position
complement(3174664..3177549)
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AA seq
961 aa
AA seq
DB search
MTQDRIPLAALEHGTPFADRHVGPRPAELARILDVIGVGSLEELAQRAIPPSIRERELVL
DLPAPATETEALAELRVLASRNRPMTQMIGLGYYGTITPPVIRRNVLESPAWYTAYTPYQ
PEISQGRLEALLNFQTMVADLTALPLSNASMLDEATAAAEAMTLVRRAGKSKSTKFVVDA
DTLPQTLAVIGTRAEPLGIEIVVADLSQGIEGLGLGGDFFGVLLSYPGASGVVRDQESVI
AEVHKAGALAVVVADLLALTLLRPPGEVGADVVVGTTQRFGVPIGFGGPHAGYMAVRTGL
ERQLPGRLVGVSVDADGDRAYRLALQTREQHIRREKATSNICTAQVLLAVIASMYGVYHG
PDGLRAIGTRAHRMATVLAGGLLEGGVDVLHGEFFDTVQAHVPDRAAEVVEAARARGINL
RLVDGSTVAIACDETTTRANLVDVWQAFGVVVSDVDALDADTADGIPAELRRTSEFMTHP
VFHRHRSETALLRYLRALSDKDVALDRSMIPLGSCTMKLNATAEMEPITWPEFADLHPFA
PAEDAEGLLALVKDLEDWLAEVTGYDAVSLQPNAGSQGEFAGLLAIRAYHRGRGQAARDI
CLIPSSAHGTNAASAVMAGMKVVVVKCDDKGNIDLAHLRATVDEHRDDLAAIMITYPSTH
GVYEDTVRDVCGLVHDAGGQVYVDGANLNALIGLAQYGKFGSDVSHLNLHKTFCIPHGGG
GPGVGPIGVRSHLAPYLPNHPLQPLAGPETGVGPISGAPWGSASILPISWAYVRMMGADG
LRRATLTAVAAANYVARRLDEHYPVLYTGEGGFVAHECILDLRGITKTTGVTVDDVAKRL
ADYGLHAPTMSFPVPGTLMVEPTESEDLGEIDRFIDAMIAIRREIDQVASGEWPADDNPL
RNAPHTAASIAREWNHPYSREVAVFPAGAGAPKIWPPVRRIDGAKGDRNLVCSCPPISAY
S
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaggaccgcattcctctcgccgctctcgagcacggcaccccgttcgccgaccgc
cacgtcggcccccgtccggccgagctggccaggatcctcgacgtcatcggtgtcggttcg
ctggaggagttggcgcagcgggcgatcccgccgtcgatccgcgagcgcgagctggtcctg
gacctgccggccccggccacggagaccgaggcgctggccgagctgcgcgtgctggcctcc
cgcaaccggccgatgacgcagatgatcggcctcggctactacggcacgatcacgcccccg
gtgatccgccgcaacgtgctggaaagcccggcctggtacacggcctacacgccctaccag
ccggagatctcgcagggccgcctcgaggcgctgctcaacttccagacgatggtcgccgac
ctgaccgcgctgccgctgtcgaacgcctccatgctcgacgaggccaccgccgccgccgag
gcgatgacgctggtgcgccgcgcgggcaagtcgaagtcgaccaagttcgtcgtggacgcg
gacacgctgccgcagacgctggccgtgatcggaaccagggccgagccgctgggcatcgag
atcgtcgtcgcggacctgtcgcagggcatcgagggcctcgggctgggcggcgacttcttc
ggcgtgctgctgtcctaccccggcgcgtccggtgtggtgcgcgaccaggagtcggtcatc
gccgaggtgcacaaggccggcgcgctcgcggtcgtggtcgcggacctgctggcgctcacg
ctgctgcgcccgcccggcgaggtcggcgcggacgtcgtcgtgggcaccacccagcgcttc
ggcgtgccgatcggcttcggcggcccgcacgccggttacatggcggtgcgcaccggcctg
gagcggcagctgcccggccgactggtcggcgtgtccgtggacgccgacggcgaccgcgcg
taccggctcgcgctccagacccgcgagcagcacatccgccgcgagaaggcgaccagcaac
atctgcacggcgcaggtcctgctcgccgtgatcgcctcgatgtacggcgtctaccacggc
cccgacggcctgcgcgccatcggcaccagggcgcaccggatggccaccgtgctcgccggg
ggcctgctcgaaggcggcgtggacgtgctgcacggcgagttcttcgacaccgtccaggcg
cacgtgcccgaccgcgcggccgaggtcgtcgaggccgcccgcgcccgcggcatcaacctg
cggctggtcgacgggtcgacggtcgccatcgcctgcgacgagaccacgacccgcgccaac
ctggtcgacgtgtggcaggcgttcggcgtggtggtgtcggacgtggacgcgctcgacgcg
gacaccgccgacggcatcccggccgagctgcgccgcacgtcggagttcatgacgcacccg
gtgttccaccgccaccgctcggaaaccgcgctgctgcgctacctgcgcgcgctgtcggac
aaggacgtcgcgctggaccggagcatgatcccgctgggctcgtgcacgatgaagctcaac
gccacggccgagatggaacccatcacctggcccgagttcgccgacctgcacccgttcgcg
cccgccgaggacgccgagggcctgctcgcgctggtgaaggacctggaggactggctggcc
gaggtcaccggctacgacgccgtgagcctccagccgaacgcgggcagccagggcgagttc
gccggtctgctggcgatccgcgcgtaccaccgcggccgcggccaggccgcccgcgacatc
tgcctcatcccgtccagcgcgcacggcacgaacgccgccagcgccgtgatggcgggcatg
aaggtcgtcgtggtgaagtgcgacgacaagggcaacatcgatctcgcccacctgcgcgcc
acggtcgacgagcaccgcgacgacctcgccgcgatcatgatcacctacccgtccacgcac
ggcgtgtacgaggacaccgtccgcgacgtctgcggcctggtgcacgacgcgggcggccag
gtgtacgtcgacggcgcgaacctcaacgccctgatcggcctcgcgcagtacggcaagttc
ggctcggacgtctcgcacctgaacctgcacaagacgttctgcatcccgcacggcggcggc
ggccccggcgtcggcccgatcggcgtgcgctcgcacctcgcgccgtacctgccgaaccac
ccgctccagccgctggccggtcccgagaccggcgtcggcccgatcagcggcgccccgtgg
ggctccgcgtcgatcctgccgatctcgtgggcgtacgtccgcatgatgggcgccgacggc
ctccgccgcgccaccctgaccgcggtcgccgccgccaactacgtggcccggcgcctggac
gagcactacccggtcctctacaccggcgagggcggcttcgtcgcccacgagtgcatcctc
gacctgcgcggcatcaccaagacgaccggcgtcaccgtcgacgacgtggccaagcgcctc
gccgactacggcctgcacgccccgacgatgtcgttccccgtgcccggcacgctgatggtc
gagccgacggagagcgaggacctgggcgagatcgaccggttcatcgacgcgatgatcgcg
atccgccgcgagatcgaccaggtggcttccggcgagtggcccgccgacgacaacccgctc
cgcaacgcgccgcacaccgcggcgtccatcgcgcgcgagtggaaccacccctacagccgt
gaggtggccgtcttcccggcgggcgcgggcgccccgaagatctggccgcccgtccgccgg
atcgacggcgccaagggcgaccgcaacctggtctgctcctgcccgccgatctccgcctac
agctag
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