Umezawaea sp. Da 62-37: RM788_13870
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Entry
RM788_13870 CDS
T09853
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
ume
Umezawaea sp. Da 62-37
Brite
KEGG Orthology (KO) [BR:
ume00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ume03021
]
RM788_13870
Transcription machinery [BR:
ume03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RM788_13870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
HTH_3
HTH_24
MarR_2
MarR
Sigma70_ECF
HTH_AsnC-type
HTH_23
DUF7343
PF0610-like_N
HTH_28
HTH_ParB
HNF-1_N
DUF1492
KORA
HTH_26
Phage_antitermQ
DUF134
Motif
Other DBs
NCBI-ProteinID:
WNV89345
LinkDB
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Position
3187472..3188290
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AA seq
272 aa
AA seq
DB search
MTETGAETTTTQAPGPAASSGTRGDYDHLAPLFVTLAATPADDPRRERLRDELVTEHLPV
AKHIARRFGNRGEPHDDLVQVATVGLINAVDRFDPERGSDFLSFAVPTIMGEVRKYFRDS
SWSVRMPRRLKELHLAINAGSSRLSQTLGRAPTPSELAAHLGLSREEVHEGLAAGNAYHS
ASLDDMLLADDSSISLGNTLGANDPEMEVIEQREALNPLLEQLPERERKIVVMRFFGNMT
QTQIAEKIGISQMHVSRLLAKTLRQLRDGLEE
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgagaccggcgcggagaccacgacgacccaggcccccggcccggcggcgtcgtcg
ggcacgcggggcgactacgaccacctcgcaccgcttttcgtgacgttggcggccaccccg
gccgacgacccgcgacgggaacggctgcgcgatgaactggtgaccgagcacctgccggtc
gccaagcacatcgcgcgcaggttcggcaaccgcggcgagccgcacgacgacctcgtgcag
gtggcgacggtcggtctgatcaacgcggtggaccggttcgaccccgagcgcggcagcgac
ttcctgtcgttcgccgtgccgacgatcatgggcgaggtccggaagtacttccgggactcc
agctggtcggtgcggatgcccaggcggctcaaggagctgcacctggcgatcaacgcgggg
tcttcccggctgtcgcagacgttgggtcgggcgccgactcccagtgagctggccgcgcac
ctcgggctttcccgcgaggaggtccacgaggggctggcggcgggcaacgcctaccacagc
gcgtcgctggacgacatgctgctggcggacgacagctcgatctcgctgggcaacacgctc
ggtgccaacgatcccgagatggaggtgatcgagcagcgggaggcgctgaacccgctgctc
gaacagctaccggaacgggaacggaagatcgtggtcatgcggttcttcggcaacatgacc
cagacccagatcgcggagaagatcggcatctcgcagatgcacgtgtcgcgcttgctggcg
aagaccttgcgccagctgcgcgacggcctggaggagtga
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