KEGG   Umezawaea sp. Da 62-37: RM788_14000
Entry
RM788_14000       CDS       T09853                                 
Name
(GenBank) AMP-dependent synthetase/ligase
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
ume  Umezawaea sp. Da 62-37
Pathway
ume00061  Fatty acid biosynthesis
ume00071  Fatty acid degradation
ume01100  Metabolic pathways
ume01212  Fatty acid metabolism
ume02024  Quorum sensing
ume04146  Peroxisome
Module
ume_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:ume00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    RM788_14000
   00071 Fatty acid degradation
    RM788_14000
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    RM788_14000
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RM788_14000
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:ume01004]
    RM788_14000
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ume04147]
    RM788_14000
Enzymes [BR:ume01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     RM788_14000
Lipid biosynthesis proteins [BR:ume01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   RM788_14000
Exosome [BR:ume04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   RM788_14000
  Exosomal proteins of breast cancer cells
   RM788_14000
SSDB
Motif
Pfam: AMP-binding AMP-binding_C_3
Other DBs
NCBI-ProteinID: WNV89367
LinkDB
Position
complement(3209169..3210929)
AA seq 586 aa
MSVPTVGSARVVSDLPFVAAQVHQDRVAWRYREHGAWQQKTFTEVAEAVGELAAGFAHAG
VRVGDRVAVLAETRYEWSIAGLAVLAAGGIVVPIYASSSPEECAYIIENSGAVLLVAENA
AQAGKIDLAALPDLREVLVVDADSEHRTTADLAEEGRANPAGEELESRRAGLSPDDPSVI
IYTSGTTGPPKGCVLTHRNWLAMCHLTEELSYVVADDTVYLFLPLAHVFAQITQFSALYM
GATLAYFGGDAKRIVPELAEVKPTFLPSVPRIFEKIYTIATAGIPAEQLQQAVGVGLKHR
ALTAAGQPVPPELEAAFTQVDAVFARVRGVFGGRLRQALSGAAPISPEVLNFFLAAGVPV
LEGYGMSESTGVGTTNTLGKFRIGSVGAFGVGGLDVRIAEDGEILMNGPHLFAGYWRNPE
ATAEVLQDGWLHTGDLGVIDEDGFVTITGRKKDIIITAGGKNIAPANVENQLRQSRWISH
AVVFGDRRPYLVALITLDAEEIVPWAEQQGIAGTYAELVAHPTVVELVQGLVDDANAHFV
KDSQIKRFSILDRDLSQEDGELTPTLKVKRKVIHSVHEDLYQGLYT
NT seq 1761 nt   +upstreamnt  +downstreamnt
atgtccgtccccacggtcggttccgcgcgcgtcgtctcggacctcccgttcgtcgccgca
caggtccaccaggaccgggtcgcctggcgctaccgcgagcacggcgcctggcagcagaag
acgttcaccgaggtcgcggaggcggtgggggagctggccgcgggcttcgcgcacgccggt
gtccgggtcggcgaccgggtcgccgtgctggccgagacccgctacgagtggtcgatcgcc
gggctggcggtgctcgccgcgggcggcatcgtcgtgccgatctacgcgagcagctccccg
gaggagtgcgcgtacatcatcgagaactccggcgcggtgctgctcgtcgccgagaacgcc
gcccaggccgggaagatcgacctcgccgcgctgccggacctgcgcgaggtgctggtggtc
gacgccgactccgagcaccgcaccaccgccgacctggccgaggagggtcgggccaacccg
gccggcgaggagctggagtcgcgccgcgcgggcctctcgccggacgacccgagcgtgatc
atctacacctcgggcacgaccgggccgcccaagggctgcgtgctgacccaccgcaactgg
ctggcgatgtgccacctcaccgaggagctgtcctacgtcgtcgccgacgacacggtgtac
ctgttcctgccgctggcgcacgtgttcgcgcagatcacccagttcagcgcgctgtacatg
ggggcgacgctggcgtacttcggcggcgacgcgaagcggatcgtgccggagctggccgag
gtcaagccgacgttcctgccgtccgtgccgcggatcttcgagaagatctacaccatcgcc
accgcgggcatccccgccgagcagctccagcaggccgtcggcgttggcctcaagcaccgc
gccctgaccgccgcgggccagcccgtgccgccggagctggaagccgctttcacgcaggtc
gacgccgtgttcgcccgcgtgcgcggcgtgttcggcggcaggctccgccaggcgctgtcc
ggcgcggcacccatctcacccgaggtgctgaacttcttcctcgccgcgggcgtgccggtg
ctggagggctacggcatgagcgagtccaccggcgtgggcaccacgaacacgctgggcaag
ttccggatcggttcggtcggcgcgttcggcgtcggcggcctggacgtccggatcgccgag
gacggcgagatcctgatgaacggaccgcacctgttcgcgggctactggcgcaaccccgag
gccaccgccgaggtgctccaggacggctggctgcacaccggcgaccttggtgtgatcgac
gaggacggcttcgtgacgatcaccggccgcaagaaggacatcatcatcaccgcgggcggc
aagaacatcgcccccgccaacgtcgagaaccagctgcgccagtcccgctggatctcccac
gcggtcgtcttcggcgaccgccgcccctacctcgtcgccctgatcaccctcgacgccgag
gagatcgtgccctgggccgagcagcagggcatcgcgggcacctacgccgaactcgtcgcc
cacccgacggtcgtggaactggtgcagggcctggtggacgacgccaacgcccacttcgtc
aaggactcgcagatcaagaggttcagcatcctcgaccgcgacctgtcccaggaggacggt
gagctcaccccgaccctgaaggtgaagcgcaaggtcatccactcggtgcacgaggacctc
taccaggggctgtacacctga

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