KEGG   Umezawaea sp. Da 62-37: RM788_16225
Entry
RM788_16225       CDS       T09853                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
ume  Umezawaea sp. Da 62-37
Brite
KEGG Orthology (KO) [BR:ume00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ume03016]
    RM788_16225 (truB)
Enzymes [BR:ume01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     RM788_16225 (truB)
Transfer RNA biogenesis [BR:ume03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    RM788_16225 (truB)
 Prokaryotic type
    RM788_16225 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C TruB_C_2 DKCLD PseudoU_synth_2
Other DBs
NCBI-ProteinID: WNV89783
LinkDB
Position
complement(3692153..3693061)
AA seq 302 aa
MSATPRQPRPTVPPGLVVIDKPDGMTSHDVVARVRRILGTRKVGHAGTLDPMATGVLVLG
IERATKLLGHLALDSKAYLSTISLGSSTTTDDAEGEVLSTVDASAVPEDLIRAGVAKLTG
PIQQVPSAVSAVKVDGKRAYARVRAGEEVSLPPRPVTVHRFDVLSIRREGATTELDVMVE
CSSGTYVRALARDLGADLGVGGHLAALRRTRVGPFDLRVARTLEKLEADPGLSLDLDSAV
ATAFPRREIEPAEVVALSHGQRLPAGGFEGTYGVFGPDGHVVALAKDEEGVARSVVVLSP
AG
NT seq 909 nt   +upstreamnt  +downstreamnt
gtgtccgcaacccctcgccagccccgccccaccgtcccgcccggtctggtcgtcatcgac
aagccggacggcatgacgtcgcacgacgtcgtcgcccgcgtgcgccgcatcctcggcacc
cgcaaggtcggccacgccggcaccctcgacccgatggcgaccggcgtcctcgtgctcggc
atcgagcgcgcgaccaagctcctgggccacctcgccctggacagcaaggcctacctgtcc
acgatcagcctcggctcgtcgaccaccaccgacgacgccgagggcgaggtcctgtccaca
gtggacgcctccgccgtgcccgaggacctgatccgcgcgggcgtggcgaagctgaccggg
ccgatccagcaggtgcccagcgccgtgagcgcggtgaaggtcgacggcaagcgggcgtac
gcgcgggtgcgggcgggcgaggaggtcagcctgccgccgcgaccggtgacggtgcaccgg
ttcgacgtgctgtcgatccggcgcgagggggcgaccaccgagctggacgtcatggtggag
tgctcgtccgggacctacgtgcgggccctggctcgcgacctcggggcggacctgggcgtc
ggcggacacctggcggccctgcgccggacgcgggtcgggccgttcgacctgagggtcgcc
cgcaccctggagaagctggaggcggatccggggctctcgcttgacctggactcggccgtc
gccacggccttcccgcgccgcgagatcgagcccgccgaggtcgtcgcgctgtcccacggc
cagcggctcccggcaggcggcttcgagggcacctacggcgtcttcgggccggacgggcac
gtggtcgcactggccaaggacgaggagggtgtcgccaggtcggtggtagtcctctcgccc
gcgggctag

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