Umezawaea sp. Da 62-37: RM788_17160
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Entry
RM788_17160 CDS
T09853
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ume
Umezawaea sp. Da 62-37
Pathway
ume03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ume00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RM788_17160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ume03400
]
RM788_17160
Enzymes [BR:
ume01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RM788_17160
DNA repair and recombination proteins [BR:
ume03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RM788_17160
Prokaryotic type
RM788_17160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DUF6139
Motif
Other DBs
NCBI-ProteinID:
WNV89959
UniProt:
A0AA96R6G5
LinkDB
All DBs
Position
complement(3875492..3876169)
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AA seq
225 aa
AA seq
DB search
MAGRPLNEIVETGWAEALAPVSDRIAEMGEFLRTEVAAGRTYLPAGENVLRAFKQPFHSV
RALIVGQDPYPTPGHAVGLSFSVSPETRPIPKSLVNIYKEYVEDLGYPMPTNGDLTPWTE
QGVLLLNRSLTVEPGKSNAHQGKGWEDVTEQAIRALAAREEPMVAILWGRNARNLRPLLD
PIPCIESAHPSPLSAHAGFFGSKPFSRANELLEKQGAEPINWKLP
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
gtggctggacgtcccttgaacgagatcgtggaaaccggatgggctgaagccctcgccccc
gtttccgaccgcatcgccgagatgggcgagttcctgcgaacagaggtcgccgcgggacgc
acgtacctgcccgcgggcgagaacgtgctgcgcgccttcaagcagccgttccacagcgtg
cgcgcgctcatcgtcggccaggacccgtacccgacaccgggccacgccgtcggcctgagc
ttctcggtgtccccggagacgaggcccatccccaagagcctggtcaacatctacaaggag
tacgtcgaggacctcggctaccccatgcccaccaacggcgacctgaccccgtggaccgag
cagggcgtcctcctgctcaacaggtccctcacggtcgagccgggcaagtccaacgcccac
cagggcaagggctgggaagacgtcacggaacaggccatccgcgccctcgcggcccgcgag
gaacccatggtcgcgatcctgtggggccgcaacgcccgcaacctccgccccctcctcgac
cccatcccgtgcatcgaatccgcccaccccagcccgctctcggcgcacgccgggttcttc
gggtcgaagccgttcagccgggcgaacgagctgctggagaagcagggcgcggaaccgatc
aactggaagctgccgtag
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