KEGG   Umezawaea sp. Da 62-37: RM788_18255
Entry
RM788_18255       CDS       T09853                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
ume  Umezawaea sp. Da 62-37
Pathway
ume00010  Glycolysis / Gluconeogenesis
ume00020  Citrate cycle (TCA cycle)
ume00260  Glycine, serine and threonine metabolism
ume00280  Valine, leucine and isoleucine degradation
ume00310  Lysine degradation
ume00380  Tryptophan metabolism
ume00620  Pyruvate metabolism
ume00630  Glyoxylate and dicarboxylate metabolism
ume00640  Propanoate metabolism
ume00670  One carbon pool by folate
ume00785  Lipoic acid metabolism
ume01100  Metabolic pathways
ume01110  Biosynthesis of secondary metabolites
ume01120  Microbial metabolism in diverse environments
ume01200  Carbon metabolism
ume01210  2-Oxocarboxylic acid metabolism
ume01240  Biosynthesis of cofactors
Module
ume_M00009  Citrate cycle (TCA cycle, Krebs cycle)
ume_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ume_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
ume_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:ume00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    RM788_18255 (lpdA)
   00020 Citrate cycle (TCA cycle)
    RM788_18255 (lpdA)
   00620 Pyruvate metabolism
    RM788_18255 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    RM788_18255 (lpdA)
   00640 Propanoate metabolism
    RM788_18255 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    RM788_18255 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    RM788_18255 (lpdA)
   00310 Lysine degradation
    RM788_18255 (lpdA)
   00380 Tryptophan metabolism
    RM788_18255 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    RM788_18255 (lpdA)
   00670 One carbon pool by folate
    RM788_18255 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ume04147]
    RM788_18255 (lpdA)
Enzymes [BR:ume01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     RM788_18255 (lpdA)
Exosome [BR:ume04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   RM788_18255 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 GIDA Thi4 HI0933_like FAD_oxidored FAD_binding_3 FAD_binding_2 DAO Amino_oxidase NAD_binding_8 RecQ-1-like_HTH 3HCDH_N Lycopene_cycl T6SS_TssG
Other DBs
NCBI-ProteinID: WNV90162
UniProt: A0AA96TRE5
LinkDB
Position
complement(4107759..4109144)
AA seq 461 aa
MSAHFDVVVLGAGPGGYVAAIRSAQLGLKTAIIEEKYWGGVCLNVGCIPSKALLRNAELA
HIFTHEAKTFGIKVDGTVTFDYGVAFQRSRKVAEGRVKGVHFLMKKNGVTEYQGRGEFTD
DRTIVVNGETVTFDHAIISAGATTRMLPGTAKSDRVVTYEEQILSEELPESIIIAGAGAI
GVEFAYVMHNYGVKVTIVEFLDRMVPLEDVEVSTELAKRYKKLGVEVRTGTRVDSIDESG
PKVRVTVTKDGKEEVLEADKVMQAIGFQPRVEGYGLEKTGVELTERGAIAIDGRCRTSVP
HIFAIGDVTAKLMLAHAAEAMGIVAAETIGDAETMELDYVMIPRATFCQPQIASFGYTEA
QAREKGFDVQVAKFPFTANGKAHGLNEPGGFVKLISDKAHGELLGAHIIGPEATELLPEL
TLAQQWDLTVTEVARNVHAHPTLGEAVKEAVHGLAGHMINF
NT seq 1386 nt   +upstreamnt  +downstreamnt
atgagcgcacactttgacgtcgtggtcctcggtgcgggccctggagggtacgtcgccgcg
atccggtcggcccaactcggcctgaagaccgcgatcatcgaggagaagtactggggcggt
gtgtgcctcaacgtcggctgcatcccctcgaaggcgttgctgcgcaacgccgagctggcc
cacatcttcacccacgaggcgaagaccttcggcatcaaggtggacggcacggtcaccttc
gactacggggtggcgttccagcgcagccgcaaggtcgcggaggggcgcgtcaagggcgtg
cacttcctgatgaagaagaacggcgtcaccgagtaccagggccgcggcgagttcaccgac
gaccgcacgatcgtcgtgaacggcgagacggtgacgttcgaccacgcgatcatctcggcg
ggcgcgacgacccggatgctgcccggcacggccaagagcgaccgcgtggtgacgtacgag
gagcagatcctcagcgaggagctccccgagagcatcatcatcgcgggcgcgggcgcgatc
ggcgtcgagttcgcctacgtgatgcacaactacggtgtgaaggtcaccatcgtcgagttc
ctcgaccggatggtgccgttggaggacgtcgaggtctccactgagctggccaagcgctac
aagaagctcggcgtcgaggtccgcaccggcacccgcgtcgactcgatcgacgagtccggc
ccgaaggtgcgcgtcaccgtcaccaaggacggcaaggaagaggtcctggaggccgacaag
gtcatgcaggccatcggtttccagccgcgcgtcgagggctacggcctggagaagaccggt
gtggagctgaccgagcgcggcgccatcgccatcgacggccgctgccgcacctccgtgccg
cacatcttcgcgatcggcgacgtcaccgcgaagctgatgctggcgcacgccgccgaggcc
atgggcatcgtcgccgccgagaccatcggcgacgcggagacgatggaactcgactacgtg
atgatcccgcgcgccacgttctgccagccgcagatcgcgagcttcgggtacaccgaggcg
caggcccgcgagaagggcttcgacgtgcaggtcgcgaagttccccttcaccgccaacggc
aaggcgcacggcctcaacgagcccggcgggttcgtgaagctgatcagcgacaaggcgcac
ggcgagctgctgggcgcgcacatcatcgggccggaggcgaccgagctgctgcccgagctg
acgctggcccagcagtgggacctgacggtgaccgaggtcgcgcgcaacgtccacgcgcac
ccgacgctcggcgaggccgtcaaggaagccgtgcacgggctcgcgggccacatgatcaat
ttttga

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