Umezawaea sp. Da 62-37: RM788_21305
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Entry
RM788_21305 CDS
T09853
Name
(GenBank) serine hydrolase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
ume
Umezawaea sp. Da 62-37
Pathway
ume00550
Peptidoglycan biosynthesis
ume01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ume00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RM788_21305
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ume01002
]
RM788_21305
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ume01011
]
RM788_21305
Enzymes [BR:
ume01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RM788_21305
Peptidases and inhibitors [BR:
ume01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
RM788_21305
Peptidoglycan biosynthesis and degradation proteins [BR:
ume01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
RM788_21305
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
LapA_dom
C3orf18_N
Motif
Other DBs
NCBI-ProteinID:
WNV90723
LinkDB
All DBs
Position
complement(4743077..4744396)
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AA seq
439 aa
AA seq
DB search
MPSTVRRPAIALVLTACTLMATAVLAAPIGTAQSAGTQAPACDNRLSPPPPVDTSEQVPD
GTKPPSPLPVPEVPVGGDRLAECGLVLPANARPLPDDLTAASWVLADMDSGAVLASFDPH
GRQRPASVMKVLLAVVVAKELPLNTTVVATQEDLDQECYCVGLRNGGEYTVEQLMQALLM
ASGNDVAHALARRLGGVPSAVRKMNALAAELGALDTRAITPSGLDAPGTSTSAYDVAVIF
RAAMKYPDFAKAIQTPQIDFPAPGGRGTVPVVNDNELLSAYNGMLGGRTGFTDDALHTYV
GAAERNGKRLVVALLRGQQQPVPITDQATALLDYGFALQGTDNVGKLVDGAPQAKKKTTE
LKPTETSSPDVPNGTASTRAQGEKTAMEAAFGTVGLPITAVAGLGLLLGLLMYIRSKRAR
AARARRDAEQQEKLAKLGL
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
gtgccttccaccgttcgacggcccgccatagccctggttctgaccgcgtgcacgctgatg
gccaccgcggttctggccgcgccgatcggcaccgcgcagtcggccgggacgcaggcgcca
gcgtgcgacaaccgcctcagcccaccgcctccggtcgacacgtcggagcaggtcccggac
ggcacgaagccgccgagcccgctgcccgtccccgaggtgcccgtcggcggggaccgcctc
gccgagtgcggcctggtgctgccggcgaacgcccgaccgctgcccgacgacctgaccgcc
gcgagctgggtgctggcggacatggacagcggcgcggtgctggcctcgttcgacccgcac
ggcaggcagcggcccgcgtcggtgatgaaggtgctgctggccgtggtggtggccaaggag
ctgccgctgaacacgacggtcgtcgcgacgcaggaggacctggaccaggagtgctactgc
gtcggcctgcgcaacggcggcgagtacaccgtcgagcagctcatgcaggcgctgctgatg
gcgtcgggcaacgacgtggcgcacgcgctcgcgcggcggctgggcggcgtgcccagcgcg
gtccgcaagatgaacgcgctggccgccgagctgggcgcgctggacacccgcgccatcacc
ccgtccggcctggacgctcccggcacgagcacctcggcctacgacgtcgcggtgatcttc
cgcgcggccatgaagtacccggacttcgccaaggcgatccagaccccgcagatcgacttc
cccgcgcccggcggccgggggacggtgccggtggtgaacgacaacgagctgctcagcgcg
tacaacgggatgctgggcgggcgcaccgggttcaccgacgacgcgctgcacacgtacgtg
ggcgccgcggagcgcaacgggaagcggctggtggtcgcgttgctgcgcgggcagcagcag
ccggtgccgatcaccgaccaggcgaccgcgctgctcgactacgggttcgcgctccagggg
acggacaacgtcggaaagctcgtcgacggggcgccgcaggcgaagaagaagaccaccgag
ttgaagccgacggagaccagttcgccggacgtgcccaacgggaccgcgtccaccagggcg
cagggcgagaagaccgcgatggaggcggcgttcggcaccgtcgggctgccgatcacggcc
gtcgccggtctgggtctcctgctggggctgctgatgtacatccggtccaagcgcgccagg
gccgcccgcgcccgccgtgacgcggagcagcaggagaagctggcgaagctcgggctgtag
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