Umezawaea sp. Da 62-37: RM788_21695
Help
Entry
RM788_21695 CDS
T09853
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ume
Umezawaea sp. Da 62-37
Pathway
ume03420
Nucleotide excision repair
ume03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ume00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RM788_21695 (pcrA)
03430 Mismatch repair
RM788_21695 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ume03400
]
RM788_21695 (pcrA)
Enzymes [BR:
ume01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RM788_21695 (pcrA)
DNA repair and recombination proteins [BR:
ume03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RM788_21695 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
RM788_21695 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
AAA_16
DEAD
Terminase_6N
ResIII
Motif
Other DBs
NCBI-ProteinID:
WNV90795
LinkDB
All DBs
Position
complement(4827347..4829725)
Genome browser
AA seq
792 aa
AA seq
DB search
MSALFDLPASPPSTRPSRLLDDLNPAQRRAVEHAGSPLLVVAGAGSGKTRVLARRIAHLL
AERQVHPGEIMAITFTNKAAAEMKERVSDLVGPRARSMWVSTFHSMCVRVLRREAKTLGM
SSNFSIYDSDDSRRLITLVARDLDLDPKRYPARTLSIHISNLKNELVDAETAAARATNDL
ERRVAEVYSSYQRRLGESNSMDFDDLIMKTVELLQNFPAVAEHYRRRFRHVLVDEYQDTN
HAQYTLVREFVGTGADGIPPGELCVVGDADQSIYAFRGATIRNIVEFERDYPQATTIMLE
QNYRSTQNILTAANAVISRNPDRREKRLWSDLGEGEKIVGYVADNEHDEAAFVAGEIDKL
VDGGDATNGEIAVFYRTNNQSRVFEEIFIRLGLPYRVVGGVRFYERREVRDALAYLRALA
NPDDTVSMRRIMNVPKRGIGDRAEVCVSNHAEKYRMSFHAALRDAVAGKVAFLNPRSQRS
IGGFIDLMDELGKLVERGDDVADILEAVLEKTAYRAELEASEDPQDHTRVENLNELVTVA
REFGDLSALAPVSSDAEAVEVVEVPEEDEGLPTESSLAAFLERVSLVADADSIPDADSDG
MVTLMTLHTAKGLEYPVVFSTGWEDGIFPHMRALGDPQELAEERRLAYVGITRAQQRLYL
SRALVRSAWGQPSANPASRFLDEIPTDLMDWRRVEPERSGPAAATTWGRRGGGDSAQAGL
AARGMRTSQFKGWNEAPAITLDVGDRVTHDKYGLGRVIAVDGSGPRATATIDFGGAGTIR
LMLIGGVPITKL
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccttgttcgacttgcccgcgagtcccccgtccactcggccgtccaggttgctc
gacgacctgaaccccgcccagcggcgggcggtggagcacgccggatcgccgctgttggtg
gtggcgggcgccggctccggtaaaacgagggtcctggcccgacgcatcgcccacctgctc
gccgaacgccaggtgcaccccggcgagatcatggcgatcaccttcaccaacaaggccgcg
gccgagatgaaggagcgcgtctccgacctcgtcggcccgcgcgcccggtcgatgtgggtg
tcgacgttccactccatgtgcgtgcgggtcctgcgccgcgaggccaagacgctcggcatg
tcgtcgaacttctcgatctacgactcggacgactcccgccgcctgatcacgctggtcgcg
cgcgacctcgacctcgacccgaagcgctacccggcgcggacgctgtcgatccacatctcg
aacctcaagaacgagctggtcgacgcggagaccgccgcggcgcgggcgacgaacgacctg
gaacgccgggtggccgaggtgtactcgtcctaccagcggcgactcggcgagtcgaactcc
atggacttcgacgacctgatcatgaagaccgtcgagctgctgcagaacttcccggccgtg
gccgagcactaccggcggcgcttccggcacgtgctggtcgacgagtaccaggacacgaac
cacgcgcagtacacgctggtgcgcgagttcgtgggcaccggcgccgacggcatcccgccc
ggcgagctgtgcgtcgtgggcgacgcggaccagtccatctacgcgttccgcggcgcgacg
atccgcaacatcgtggagttcgagcgggactacccgcaggccaccacgatcatgctggag
cagaactaccgctccacccagaacatcctgaccgccgcgaacgcggtcatctcgcgcaac
ccggaccgccgtgagaagcggctgtggagcgacctcggcgagggcgagaagatcgtcggc
tacgtcgccgacaacgagcacgacgaggccgcgttcgtcgcgggtgagatcgacaagctc
gtcgacggcggcgacgcgaccaacggcgagatcgcggtcttctaccgcacgaacaaccag
tcgcgcgtgttcgaggagatcttcatccgcctcggcctgccctaccgggtcgtcggcggt
gtgcggttctacgagcgccgcgaggtgcgcgacgcgctggcgtacctgcgcgcgctggcg
aacccggacgacacggtgtccatgcggcgcatcatgaacgtgcccaagcggggcatcggc
gaccgggccgaggtgtgcgtctccaaccacgccgagaagtaccggatgagcttccacgcc
gcccttcgcgacgccgtggcgggcaaggtcgcgttcctcaacccgcggtcgcagcggtcc
atcggcgggttcatcgacctgatggacgagctgggcaagctggtcgagcgcggcgacgac
gtggcggacatcctcgaggccgtgctggagaagacggcctaccgggccgagctggaggcc
agcgaggacccgcaggaccacacgcgcgtcgagaacctcaacgagctggtgacggtcgcc
cgcgagttcggcgacctgtccgccttggccccggtgtcctccgacgccgaggccgtggag
gtcgtcgaggtgccggaggaggacgagggcctgccgaccgagagttcgctggccgcgttc
ctggagcgcgtctcgctcgtcgcggacgccgactccatccccgacgccgactccgacggc
atggtcaccctgatgaccctgcacaccgccaagggcctcgagtacccggtcgtgttcagc
actggctgggaggacggcatcttcccgcacatgcgggcactgggcgacccccaggagctg
gccgaggaacgccgcctggcgtacgtcggcatcacccgcgcccagcagcgcctctacctg
tcccgcgccctcgtccgctccgcgtggggccagccgtccgccaacccggcgtcccgcttc
ctcgacgagatccccaccgacctcatggactggcgccgcgtcgaaccggaacgctccggc
cccgccgccgccaccacctggggccgcaggggcggcggcgactccgcccaggcgggcctg
gccgcccgcggcatgcgcacgtcccagttcaagggctggaacgaggcaccggcgatcacc
ctcgacgtcggcgaccgcgtcacccacgacaaatacggcctcggcagggtcatcgcggtc
gacggctccggccccagggccaccgccaccatcgacttcggcggcgcgggcaccatccgc
ctcatgctcatcggcggcgtccccatcaccaagctctga
DBGET
integrated database retrieval system
