Umezawaea sp. Da 62-37: RM788_25140
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Entry
RM788_25140 CDS
T09853
Symbol
dnaN
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
ume
Umezawaea sp. Da 62-37
Pathway
ume03030
DNA replication
ume03430
Mismatch repair
ume03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ume00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RM788_25140 (dnaN)
03430 Mismatch repair
RM788_25140 (dnaN)
03440 Homologous recombination
RM788_25140 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ume03032
]
RM788_25140 (dnaN)
03400 DNA repair and recombination proteins [BR:
ume03400
]
RM788_25140 (dnaN)
Enzymes [BR:
ume01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RM788_25140 (dnaN)
DNA replication proteins [BR:
ume03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RM788_25140 (dnaN)
DNA repair and recombination proteins [BR:
ume03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RM788_25140 (dnaN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_3
DNA_pol3_beta_2
Motif
Other DBs
NCBI-ProteinID:
WNV91429
UniProt:
A0AA96TTI5
LinkDB
All DBs
Position
5502551..5503690
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AA seq
379 aa
AA seq
DB search
MKIRVERDGLADAVAWVARSLPSRPPVPVLGGVMLDAGSSEGETGDSLTVSGFDYEVSAT
VGVPATVADGGKALVSGRLLADITKALPNHPVEIAVDGSRMTITCGSAKFSLPTMPVEDY
PALPNMPQLAGELAGEIFGEAVAQVAVAAGKDDTLPMLTGVRLEIGEGKLTLVATDRFRL
AMREFAWEPNETLSETAVLVPAKTLADAAKTLGGAGNKVELSLAANDGLLGLSGNGRRTT
TRLLDADFPKYRQLLPSEHSAAAIIEVDSLVQAIKRVSLVAERGTQVRLEFVDGGLRLSA
GGDDEGSAEEELPVEYTGEPVTIAFNPTYLLEGVHAVRTPKAHLSFTTPSRPALLKPVDD
DGGVAPGYLYLLMPVRLPG
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaagatccgcgtcgagcgagatggcttggccgacgccgtcgcctgggtcgcgcgcagc
ctgccgtcgaggccgcccgttccggtgctcggtggagtcatgctcgacgccgggtcgtcg
gagggtgagacgggcgattcgctgacggtctccgggttcgactacgaggtctcggcgacg
gtcggcgttcccgccacggtggccgacggcggcaaggcgctcgtctccggccgcctcctg
gccgacatcaccaaagcgttgccgaaccacccggtcgagatcgcggtcgacggctcccgg
atgacgatcacctgcggcagcgccaagttcagcctcccgacgatgccggtcgaggactac
cccgcgctgccgaacatgccgcagctcgccggcgaactggcgggcgagatcttcggcgag
gccgtcgcccaggtcgccgtcgcggcgggcaaggacgacacgctcccgatgctgaccggt
gtccggctggagatcggcgagggcaagctgaccctcgtcgcgaccgaccgcttccggctg
gcgatgcgcgagttcgcctgggagcccaacgagacgctgagcgagaccgcggtgctggtt
cccgcgaagacgctcgccgacgcggccaagaccctcgggggagcgggcaacaaggtggag
ctgtcgcttgccgcgaacgacgggctgctcggcctgtccggcaacggcaggcgcaccacg
acccggctcctcgacgccgacttccccaagtaccgccagctcctcccgagcgagcactcg
gccgcggcgatcatcgaggtcgactcgctcgtccaggccatcaagcgcgtgtcgctggtc
gccgagcgcggcacccaggtgcggctcgagttcgtcgacggcggcctgcgcctgtccgcc
ggtggcgacgacgagggcagcgccgaggaagagctcccggtcgagtacaccggcgagccg
gtcacgatcgcgttcaaccccacttacctcctggagggcgtgcacgccgtgcgcactccc
aaggcccacctgtccttcacgacccccagcaggccggcgctcctgaagccggtcgatgat
gatggcggagtggcgccgggctacctgtacctgcttatgcccgtacgcctgcccggctaa
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