Umezawaea sp. Da 62-37: RM788_29680
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Entry
RM788_29680 CDS
T09853
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ume
Umezawaea sp. Da 62-37
Pathway
ume03030
DNA replication
ume03430
Mismatch repair
ume03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ume00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RM788_29680
03430 Mismatch repair
RM788_29680
03440 Homologous recombination
RM788_29680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ume03032
]
RM788_29680
03400 DNA repair and recombination proteins [BR:
ume03400
]
RM788_29680
Enzymes [BR:
ume01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RM788_29680
DNA replication proteins [BR:
ume03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RM788_29680
DNA repair and recombination proteins [BR:
ume03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RM788_29680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
WNV82368
LinkDB
All DBs
Position
complement(6423302..6424180)
Genome browser
AA seq
292 aa
AA seq
DB search
MSAEWVAIDFENANWSRESACSVGMSLVRDGRIADRFSTYVKPPGVGGFHPFNTSIHGIT
ANTVANAPEWPQALARMLEFADGRPLVAHNAGFDMSVIRNACTATRVPWPELRYACTLMI
ARRTWQLLAYRLPHVAEAAGVALGSDTQGHADTAAEILLAAMRLHGVDEVDDLLDTLRIR
LGHQTAHTWTGAQRVPPSTRRGLFYGLNVCLTGQLTTMPRIEAQYRLAEAGAQAVPGVTS
KTDVLVVGTPEPDLFVPGRVESGEQRVARDLLDRGHRIEVIGEVDFLRRLCG
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgctgaatgggtggcgatcgacttcgagaacgccaactggtcacgggagagtgcc
tgctcagtgggcatgagcctggtgcgggacggtcggatcgcggacaggttcagcacgtac
gtcaagccgccgggcgtcggcgggttccacccgttcaacacgtcgatccacggaataacg
gcgaatacggtcgcgaatgcgcccgaatggccgcaagcattggcacgaatgctcgaattc
gccgacggtaggcccctggtcgcccacaacgccggattcgacatgagcgtcatccgcaac
gcctgcacagcgacccgcgtcccgtggcccgaactccgctacgcctgcaccctcatgatc
gcccgccgcacctggcaactgctcgcctaccgcctcccccacgtcgccgaagccgccggt
gtcgccctgggcagcgacacccagggccacgccgacaccgccgcggagatcctcctggcc
gccatgcgcctgcacggcgtcgacgaggtcgacgacctcctcgacaccctccgcatccgc
ctcggccaccagaccgcgcacacgtggaccggcgcccaacgcgtcccgccgtccacccgc
cggggcctgttctacggcctcaacgtctgcctcaccggccagttgaccaccatgccccgc
atcgaggcccagtaccggttggccgaagcgggcgctcaggccgtgccgggagtgacgtcg
aagaccgacgtgctggtcgtggggacgccggagccggacctgttcgtgccggggagggtg
gagagcggggagcagcgggtggcgcgggacctgctcgacagggggcaccggatcgaggtg
atcggggaggtggacttcctgaggcgcctttgcggatga
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