KEGG   Umezawaea sp. Da 62-37: RM788_35825
Entry
RM788_35825       CDS       T09853                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
ume  Umezawaea sp. Da 62-37
Pathway
ume00010  Glycolysis / Gluconeogenesis
ume00020  Citrate cycle (TCA cycle)
ume00260  Glycine, serine and threonine metabolism
ume00280  Valine, leucine and isoleucine degradation
ume00310  Lysine degradation
ume00380  Tryptophan metabolism
ume00620  Pyruvate metabolism
ume00630  Glyoxylate and dicarboxylate metabolism
ume00640  Propanoate metabolism
ume00670  One carbon pool by folate
ume00785  Lipoic acid metabolism
ume01100  Metabolic pathways
ume01110  Biosynthesis of secondary metabolites
ume01120  Microbial metabolism in diverse environments
ume01200  Carbon metabolism
ume01210  2-Oxocarboxylic acid metabolism
ume01240  Biosynthesis of cofactors
Module
ume_M00009  Citrate cycle (TCA cycle, Krebs cycle)
ume_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ume_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
ume_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
ume_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:ume00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    RM788_35825 (lpdA)
   00020 Citrate cycle (TCA cycle)
    RM788_35825 (lpdA)
   00620 Pyruvate metabolism
    RM788_35825 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    RM788_35825 (lpdA)
   00640 Propanoate metabolism
    RM788_35825 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    RM788_35825 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    RM788_35825 (lpdA)
   00310 Lysine degradation
    RM788_35825 (lpdA)
   00380 Tryptophan metabolism
    RM788_35825 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    RM788_35825 (lpdA)
   00670 One carbon pool by folate
    RM788_35825 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ume04147]
    RM788_35825 (lpdA)
Enzymes [BR:ume01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     RM788_35825 (lpdA)
Exosome [BR:ume04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   RM788_35825 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 GIDA HI0933_like DAO FAD_binding_2 FAD_oxidored AlaDh_PNT_C NAD_binding_8 3HCDH_N 2-Hacid_dh_C Thi4 Histidinol_dh NAD_binding_7 Amino_oxidase Lycopene_cycl Trp_halogenase
Other DBs
NCBI-ProteinID: WNV83518
UniProt: A0AA96TDX8
LinkDB
Position
complement(7754754..7756124)
AA seq 456 aa
MTDTSADLVILGGGSGGYACAFRAAEFGLSVVLVEKDKLGGTCLHRGCIPTKALLHAAEV
ADNVREGDQFGIKSSLEGIDIAGVNSYKDGVVSKLYKGLQGLVKANKVTLVEGAGTFVGP
NTVVVNGDRYTGKNVVLATGSYAKSLPGLEIGGRIITSDQALNLDFIPEKVVVLGGGVIG
VEFASVWRSFGAEVTIVEALPRLVPVEDEYASKQLERAFRKRGIKFKTGVRFTGATQNDK
GVSVSLESGDVLEADLLLVAVGRGPNSAGHGYEEAGVATDRGFVTTDDRLRTNLPNVYAV
GDIVPGLQLAHRGFQQGIFVAEEIAGQNPKVIDEAGIPRVTYCKPEVASVGLSEAAAKEK
YGTVETFVYDLAGNGKSQILKTAGGVKLVRAPDGPVVGITLVGERVGELIGEAQLIYSWE
AFPEDVAPLIHAHPTQTEALGEAFLALAGKPLHVHG
NT seq 1371 nt   +upstreamnt  +downstreamnt
gtgaccgacacctccgccgaccttgtgatcctcggtggcggctcaggcggctacgcctgc
gcgttccgcgcggccgagttcggtctgtccgtcgtcctggtcgagaaggacaagctcggg
gggacctgcctgcaccgcggctgcatcccgaccaaggccctgctgcacgcggccgaggtc
gcggacaacgtccgcgagggcgaccagttcggtatcaagagctcgctcgagggcatcgac
atcgcgggcgtgaactcgtacaaggacggcgtggtcagcaagctctacaagggtttgcaa
ggtttggtgaaggccaacaaggtcacgctcgtcgagggtgcgggcacgttcgtcggcccg
aacaccgtcgtggtgaacggcgaccgctacaccggtaagaacgtggtcctcgccaccggt
tcctacgccaagagcctccccggtctggagatcggcggccggatcatcaccagcgaccag
gcgctgaacctggacttcatcccggagaaggtcgtcgtcctgggcggcggcgtcatcggc
gtggagttcgccagcgtgtggcgctcgttcggcgccgaggtgaccatcgtcgaggcgctg
ccgcgactggtcccggtcgaggacgagtacgcctcgaagcagctggagcgcgctttccgc
aagcgcggcatcaagttcaagaccggcgtccggttcaccggcgccacccagaacgacaag
ggcgtgtcggtgtcgctggagtccggcgacgtcctcgaggccgacctgctgctggtggcc
gtgggacgcggcccgaacagcgcgggccacggctacgaggaggccggggtcgccaccgac
cgcgggttcgtcaccaccgacgaccgcctccgcaccaacctgccgaacgtgtacgccgtc
ggcgacatcgtgcccggcctgcagctcgcgcaccgcggcttccagcagggcatcttcgtc
gccgaggagatcgcggggcagaacccgaaggtcatcgacgaggccggcatcccccgcgtc
acgtactgcaagcccgaggtcgcctcggtcggtctctccgaggctgcggccaaggagaag
tacggcacggtcgagaccttcgtctacgacctggcgggcaacggcaagagccagatcctc
aagaccgcgggcggcgtcaagctcgtgagggcgcccgacggtccggtcgtcggcatcacc
ctggtgggtgagcgcgtcggcgaactgatcggtgaggcccagctgatctacagctgggag
gctttcccggaggacgtggctccgctgatccacgcccacccgacccagacagaagccctc
ggcgaggcattcctcgccctggccggcaagccgctgcacgtgcacggctga

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