Umezawaea sp. Da 62-37: RM788_39515
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Entry
RM788_39515 CDS
T09853
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ume
Umezawaea sp. Da 62-37
Pathway
ume03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ume00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RM788_39515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ume03400
]
RM788_39515
Enzymes [BR:
ume01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RM788_39515
DNA repair and recombination proteins [BR:
ume03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RM788_39515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
zf-HIT
zf-C2H2_FBX41
Motif
Other DBs
NCBI-ProteinID:
WNV84206
LinkDB
All DBs
Position
8675450..8677462
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AA seq
670 aa
AA seq
DB search
MASRTTTRRGERTPAEVLPVARVCVDVPLAHLDRPFDYQVASDQAQDAVPGSRVRVRFAG
QLVDGYVLERVEETEYGKKLAYLERVTSPEPVLSPEVHQLARVVADRFAGTLIDVLRMAI
PPRHARAEGQPSPEPAPPPAPPPAAPLAAGWTRYPFGPNLLDALLTGRQARAVWQALPAE
DWPARLAEAAATVASTGKGVLLVVPDHRDVTRVHAACAALVGETGVVALSAGLGPSERYK
RWLAVLRGSVRVVVGTRGAAFAPVADLGLVVVWDDGDDLHSEPRMPYPNVRDVLVQRAHL
TGAAFIAGGFARTAEAQLLVESNWAHEVVAARETLRTAAPRVAAVGDSDWQEVKDAAART
ARLPSIAFDAARAALAAHAPVLIQVPRRGYVPALACGSCRAATRCRRCAGPLALPGGSDD
GVPRPPYCRWCGATEAAYRCPACGSRKLRAQIVGAKRTAEELGRAFTGVPVRTSGGDEVL
ASVPGKPALVVATPGAEPVAEGGYGAVLLLDGWSLLGRADLRAAEEALRRWMTAAALAKP
GVEGGRVVVIADSTLAPVQALVRWDPVWHARQELAARTELGFPPAVRMATVDGSPDAVAA
LLDELRLPPTGEVLGPVPLDEEGTKERALVRVSRGEGRALALVLTEALGVRSARKDLDPV
RVKLDPLEVL
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcagaacgacgacgaggcggggtgagcgcaccccggcggaggtgctgccggtc
gccagggtctgcgtggacgtcccgctcgcgcacctcgaccggccgttcgactaccaggtg
gcgtcggaccaggcgcaggacgcggtgccgggcagccgggtccgggtccggttcgccggg
cagttggtcgacgggtacgtgctggagcgggtggaggagacggagtacggcaagaagctc
gcgtacctggaacgggtcacctcgccggaacccgtgctgtcgccggaggtccaccagctg
gcgcgggtggtcgccgaccggttcgcgggcacgctgatcgacgtgctgcggatggcgatc
ccgccccggcacgcccgcgccgaggggcagccctccccggagcccgcgccgccgcccgcg
ccgccgcccgcggcgccgctggcggcgggttggacgcgctacccgttcggcccgaacctg
ctggacgcgctgctcaccggccgccaggcgcgcgcggtgtggcaggcgctgcctgcggag
gactggcccgccaggctggccgaggccgccgccaccgtggcgagcaccggcaagggcgtg
ctgctggtggtgccggaccaccgcgacgtgacgcgcgtgcacgccgcgtgcgccgccctg
gtcggggagaccggcgtcgtggcgctgtcggcgggcctggggccgtccgagcggtacaag
aggtggctcgcggtgctgcgcggctcggtccgggtggtggtcggcaccaggggagcggcg
ttcgcgccggtggccgacctcgggctggtcgtggtctgggacgacggcgacgacctgcac
tccgaaccgcggatgccgtacccgaacgtccgcgacgtcctcgtgcagcgggcgcacctc
accggggccgcgttcatcgcgggcggcttcgcccgcaccgccgaggcgcagctgctggtg
gagagcaactgggcgcacgaggtggtcgccgcccgcgagaccctccgcacggccgcgccg
cgggtcgccgcggtgggcgacagcgactggcaggaggtcaaggacgccgccgcccgcacg
gcccggctgccctcgatcgcgttcgacgccgcccgcgccgcgctggccgcccacgcgccg
gtgctgatccaggtgccgcgccggggctacgtgcccgcgctggcgtgcggcagctgccgc
gccgccaccaggtgccgccgctgcgcgggcccgctcgcgctgcccggcggctcggacgac
ggcgtgccgcgcccgccgtactgccgctggtgcggcgccaccgaggccgcctaccgctgc
cccgcgtgcggctcgcggaagctgcgcgcgcagatcgtcggcgccaagcgcacggcggag
gagctgggccgcgcgttcaccggcgtcccggtgcgcacgtccggcggcgacgaggtgctc
gcgtcggtgcccggcaaaccggcgctcgtggtggcgacaccgggcgccgaaccggtggcc
gagggcgggtacggcgccgtgctgctgctcgacggctggtcgttgctcggccgcgccgac
ctgcgggcggcggaggaggcgctgcggcgctggatgaccgccgccgcgctggcgaaaccg
ggtgtcgagggcggcagggtggtcgtgatcgccgattccaccctggcgcccgtgcaggcc
ctggtccggtgggacccggtgtggcacgcccgccaggagctggccgcccgcaccgaactg
ggcttcccgcccgcggtgcggatggcgaccgtcgacggctcgccggacgccgtcgcggcc
ctgctggacgaactgcgcctgcccccgaccggcgaggtcctcggccccgtcccgctcgac
gaggagggcaccaaggagcgcgcgctggtccgggtttcccgcggtgaggggcgcgcgctg
gcgctggtgctgacggaggcgctgggggtgcgcagcgcgcgcaaggacctcgaccccgtg
cgggtgaagttggacccgctggaggtcctctga
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