Umezawaea sp. Da 62-37: RM788_44480
Help
Entry
RM788_44480 CDS
T09853
Name
(GenBank) type III PLP-dependent enzyme
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ume
Umezawaea sp. Da 62-37
Pathway
ume00300
Lysine biosynthesis
ume00470
D-Amino acid metabolism
ume01100
Metabolic pathways
ume01110
Biosynthesis of secondary metabolites
ume01120
Microbial metabolism in diverse environments
ume01230
Biosynthesis of amino acids
Module
ume_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ume00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RM788_44480
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RM788_44480
Enzymes [BR:
ume01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
RM788_44480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
FBPase_glpX
Motif
Other DBs
NCBI-ProteinID:
WNV85130
UniProt:
A0AA96QZD8
LinkDB
All DBs
Position
9839171..9840394
Genome browser
AA seq
407 aa
AA seq
DB search
MTPAEIAARFGTPAYVYDLDAVTAAHADLRSALPDPSVLYYSLKANPHPAVIGELARLGC
RAEVSSDGEVDAALAAGVRPDAVMLTGPGKSGRVIDHALRRGVTRFSVDSPTDLRRVGDH
AERHGVRTSCLLRVNADEAAAGSGLTMTGTASQFGADAGWVAARPEEFRGHKTATVTGLH
LYMGSNLMDEDALAHQLEMAIDLAARMIGHLGDLEEVDLGGGFGAPYAHRGARPRFPGLA
DRLTRVLDDRLPGWRGGAPLIAFESGRHLVADSGLLLAGVVDVKRSKGETFVVLDCGVNH
LGGMSGLRRLPRVAPDVVGGDAADVVTATLVGPLCTPLDTLGRDVRVPRVSPGDLLVVPN
VGAYGLTASLLAFLGHTPPAEVVLRGGEVFDVTRLTLTRTSTSVHSG
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgacccccgccgagatcgccgcgcggttcggcacgcccgcctacgtctacgacctcgac
gccgtcacggccgcgcacgccgacctgcggtccgcgctgcccgacccgtccgtcctgtac
tactcgctcaaggccaacccccaccccgcggtcatcggcgaactggcccggctgggctgc
cgcgccgaggtcagctccgatggcgaggtggacgcggcgctcgccgcgggcgtgcgcccc
gacgcggtgatgctcaccggccccggcaagtccggtcgcgtgatcgaccacgcgctgcgt
cgcggcgtcacccggttctccgtggactcgcccaccgacctgcgccgggtcggcgaccac
gccgaacgccacggcgtgcggacctcctgcctgctgcgcgtcaacgccgacgaggccgca
gcgggttcgggactgacgatgacgggtaccgcgtcgcagttcggcgcggacgcgggctgg
gtcgccgcccgcccggaggagttccgcggccacaagaccgccaccgtcaccggcctgcac
ctgtacatgggcagcaacctcatggacgaggacgcgctggcccaccagttggagatggcg
atcgacctcgccgcgcggatgatcgggcacctcggcgacctggaggaggtcgacctcggc
ggcggcttcggagcaccctacgcccaccgcggcgcccgcccccggttccccggtctggcc
gaccggctcacccgcgtgctcgacgaccggctgccgggctggcgcggcggcgccccgctg
atcgcgttcgagtccggacgccacctggtcgccgactccggcctgctgctcgccggggtc
gtggacgtcaagcggtccaagggggagacgttcgtggtgctggactgcggcgtcaaccac
ctcggcgggatgtccgggctgcggcgcctgcctcgcgtggcacccgacgtggtcggcggc
gacgccgcggacgtggtcaccgccaccctcgtcggcccgctgtgcacacctctggacacc
ctcggccgcgacgtccgcgtcccgcgcgtgagccccggtgacctgctcgtcgtgcccaac
gtcggcgcctacggcctgaccgcgagcctgctggccttcctcggtcacaccccacccgcg
gaggtggtgctgcgcggcggcgaggtcttcgacgtcacccggctcaccctcacccgcacc
tccacctctgtccacagtggatga
DBGET
integrated database retrieval system