Umezawaea sp. Da 62-37: RM788_45770
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Entry
RM788_45770 CDS
T09853
Name
(GenBank) type III PLP-dependent enzyme
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ume
Umezawaea sp. Da 62-37
Pathway
ume00300
Lysine biosynthesis
ume00470
D-Amino acid metabolism
ume01100
Metabolic pathways
ume01110
Biosynthesis of secondary metabolites
ume01120
Microbial metabolism in diverse environments
ume01230
Biosynthesis of amino acids
Module
ume_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ume00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RM788_45770
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RM788_45770
Enzymes [BR:
ume01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
RM788_45770
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WNV85355
UniProt:
A0AA96QZX4
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Position
10130202..10131416
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AA seq
404 aa
AA seq
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MSKYDDLAEKFGTPAYVYDLEVVAESRDQLFDMLPEGFHVFYALKSNPHPEIGRELRNGG
CRAEISSTGELANALTAGFDPAGILYTGPGKTNAELELAIAAGVRLFSVESITDLRHVGA
AAEKHEVTASCLLRINTTASSGGTGIRMMGRASQFGIDAETLPALMPALKSVPGTRVVGA
HFFTMSNAQDEGSLLGEYEFVLRTAAQLRREVGLPLEVLDIGGGFSSPYAVPGPRTGYPN
LRTGLEDLLDLHLPEWRDGGIELACESGRYLSGSSGSLLAGVVNVKEGRGSRFVILDAGI
NVLGGLSGIGRLLPAAVGIEEAGGEVGSLVGPLCTPGDSLAKATELPELAPGDIVTVPNV
GAYGVTASLISFLGRPAPTEVVVRGDEIVSVSRLDYQRAYEVSP
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagtacgacgatctcgccgagaagttcggcacacccgcctacgtctacgacctc
gaggtggtcgccgagtcgcgcgaccagctgttcgacatgctgcccgagggcttccacgtg
ttctacgcgctgaagtccaacccccatcccgagatcggccgtgagctgcggaacggcggc
tgccgcgcggagatcagctccaccggcgagctggccaacgcgctgaccgcggggttcgac
ccggccgggatcctctacaccggtcccggcaagacgaacgccgaactggagctggcgatc
gctgcgggcgtccggctgttctccgtcgagtcgatcaccgacctgcggcacgtcggcgcc
gccgccgagaagcacgaggtgacggcgtcctgcctgctgcggatcaacaccaccgccagc
agcggcggcaccggcatccggatgatgggccgcgcctcgcagttcggcatcgacgccgag
acgctgcccgcgctcatgcccgcgctcaagtcggtgcccggcacccgcgtggtcggcgcg
cacttcttcaccatgagcaacgcccaggacgagggcagcctcctcggggagtacgagttc
gtgctccgcacggccgcgcagctgcgccgggaagtcgggctgccactggaggtgctggac
atcggcggcgggttctcctcgccgtacgcggtgcccggcccgcgcaccggctacccgaac
ctccggacgggcctggaggacctgctcgacctgcacctgcccgagtggcgcgacggcggg
atcgagctggcctgcgagtccggtcggtacctgtccggcagcagcggttcgctgctggcg
ggcgtggtcaacgtcaaggagggccgcggcagccggttcgtcatcctcgacgccgggatc
aacgtcctcggcgggctgtccggaatcggcaggttgctgcccgcggcggtcggcatcgag
gaagcaggtggcgaggtgggcagcctcgtcggtccgctgtgcactcccggcgactccctc
gccaaggcgaccgagctgcccgaactggctcccggcgacatcgtcaccgtgcccaacgtc
ggcgcctacggcgtcaccgcgagcctgatcagcttcctcggccgccccgcgccgacggag
gtcgtggtgcgcggcgacgagatcgtgtcggtgtcgcgcctggactaccagcgggcttac
gaggtgtcgccatga
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