Umezawaea sp. Da 62-37: RM788_49510
Help
Entry
RM788_49510 CDS
T09853
Name
(GenBank) pectate lyase
KO
K22539
pectate lyase [EC:
4.2.2.2
]
Organism
ume
Umezawaea sp. Da 62-37
Pathway
ume00040
Pentose and glucuronate interconversions
ume01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ume00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
RM788_49510
Enzymes [BR:
ume01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
RM788_49510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase
RicinB_lectin_2
Ricin_B_lectin
CDtoxinA
Motif
Other DBs
NCBI-ProteinID:
WNV86073
UniProt:
A0AA96QSN6
LinkDB
All DBs
Position
complement(10992568..10993875)
Genome browser
AA seq
435 aa
AA seq
DB search
MSTSDRPPSTRRSHGTRWRLGAAAAVSATALAATIAALPIASPAEAAVGAGTYAVANSGS
GLCLDVPGGSTASGVQLQQASCAGSAGQKWVLTAASGGFRISSVASGLCVGVRDASTSAG
KAVEQESCTGAAGQVWSLTESGTGYRVVDTNGGKCLNLKDNSTSAGALAQTNSCDSAATK
QWAFTVAGGGGGPTTTTTTTTTTTPPGGGGGDGSGAWPSDTGSVHQTTTVNAGTFFDGGM
KRYYGIGDGGQGESQDPMFEVANGGTIQNVLLDAPAGDGIHCLGSCTIRNVWWNDVGEDA
ATFLSASSSATYLVDGGGAKSAEDKVFQHNGAGTLTIRNFQVHSSGKLYRACGNCTTSYK
RNVVLDGVTARSTKALAGINTNWGDTARFSRITVYGTTSICDKYKGVPKGEEPTKIGSGA
DGVNCIYQPSDITQK
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgagcacatcggatcgacccccgtccacgcggaggtcgcacggcacgcggtggcggttg
ggcgcggcggcggccgtgagcgccaccgcgctggcggccacgatcgccgccctgccgatc
gcctcgccggcggaggcggcggtcggcgcggggacgtacgcggtcgcgaactcgggcagc
gggctctgcctcgacgtgccggggggcagcacggcgagcggcgtgcagctccagcaggcg
tcgtgcgcgggcagcgcgggccagaagtgggtgctgaccgcggccagcggcgggttccga
atctcctcggtcgccagcggtctgtgcgtcggcgtccgggacgcctcgacgtcggcgggc
aaggcggtcgagcaggagtcgtgcaccggcgccgcgggccaggtctggtcgttgaccgag
agcgggaccggctaccgcgtggtcgacaccaacggcggcaagtgcctgaacctcaaggac
aactccacctccgcgggcgcgctggcgcagacgaactcctgcgacagcgcggccaccaag
cagtgggcgttcaccgtcgcgggcggtggtggtggtccgaccacgaccaccacgacgacg
accaccacgaccccgccgggcggcggcggcggtgacggcagcggggcttggccgtccgat
accggcagcgtgcaccagacgacgacggtcaacgcgggcacgttcttcgacggcggcatg
aagcgctactacggcatcggcgacggcggccagggcgagagccaggacccgatgttcgag
gtcgccaacggcggcaccatccagaacgtcctcctggacgcccccgcgggcgacggcatc
cactgcctggggtcctgcacgatccgcaacgtgtggtggaacgacgtcggcgaggacgcc
gccacgttcctgagcgccagctcgtcggccacctacctggtggacggcggcggcgcgaag
tccgccgaggacaaggtgttccagcacaacggcgcgggcacgctgaccatccgcaacttc
caggtgcacagctccggcaagctgtaccgggcgtgcggcaactgcaccacgtcctacaag
cgcaacgtggtcctggacggcgtgaccgcgcggtccacgaaggcgctcgcgggcatcaac
accaactggggcgacaccgcccggttctcgcggatcaccgtctacggcaccacctcgatc
tgcgacaagtacaagggcgtgccgaagggcgaggagcccacgaagatcggctccggtgcc
gacggcgtgaactgcatctaccagccgtccgacatcacccagaagtag
DBGET
integrated database retrieval system
