Ursus maritimus (polar bear): 103656971
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Entry
103656971 CDS
T03271
Symbol
CPSF6
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6 isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
umr
Ursus maritimus (polar bear)
Pathway
umr03015
mRNA surveillance pathway
umr03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
umr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103656971 (CPSF6)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
103656971 (CPSF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
umr03019
]
103656971 (CPSF6)
Messenger RNA biogenesis [BR:
umr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
103656971 (CPSF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
103656971
NCBI-ProteinID:
XP_040493181
UniProt:
A0A8M1GEQ1
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All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MADGVDHIDIYADVGEEFNQEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTV
GDDVGKGAAPNVVYTYTGKRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRAN
GQSKGFALVGVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSRKTTQSGQM
SGEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPGNLIKHLVK
GTRPLFLETRIPWHMGHSIEEIPIFGLKAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPL
AGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPF
PPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDP
YGRPPPYDRGDYGPPGREMDTARTPLSEAEFEEIMNRNRAISSSAISRAVSDASAGDYGS
AIETLVTAISLIKQSKVSADDRCKVLISSLQDCLHGIESKSYGSGSRRRERSRERDHSRS
REKSRRHKSRSRDRHDDYYRERSRERERHRDRDRDRDRERDREREYRHR
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggtgtggaccacatagacatttacgcggatgtgggcgaagagttcaatcag
gaagctgaatatggtgggcatgatcagatagatttgtatgatgatgtcatctctccatct
gcaaataatggagatgcgccagaagaccgtgattacatggatactctcccaccaactgtt
ggtgatgatgtgggtaaaggagcagcaccaaatgttgtctatacgtatactggaaagaga
attgcattgtatattggaaatttaacatggtggacaacagatgaagacttaactgaagca
gttcattctttgggagtaaatgatattttggagataaaattttttgaaaatcgagcaaat
ggccagtcaaaggggtttgcccttgttggtgttggatctgaagcatcctcaaaaaagtta
atggatctgttgcctaaaagagaacttcatggtcagaatcctgttgtaactccatgcaat
aaacagttcctgagtcaatttgaaatgcagtccaggaaaactacacaatcaggacaaatg
tctggggaaggtaaagctggtcctccaggaggcagttcacgtgcagcatttccacaaggt
ggtagaggacggggccgttttccaggggctgttcccggtggggacagatttcctggacca
gcgggaccaggagggccacccccaccttttccaggaaatttgatcaagcatcttgttaaa
ggaactcggcctttgttcctggaaactaggattccatggcatatggggcacagcatagag
gaaatacccatttttggcctaaaagctggacagactccaccgcgtccacccttaggtcct
ccaggcccacctggtccaccgggtcctccacctcctggtcaggttctgcctcctccttta
gctgggcctcctaatcgaggagatcgccctccaccaccagttctttttcctggacaacct
tttgggcagcctccattgggtccgcttcctcctggccctccacctccagttccaggctac
ggcccccctcctggtccaccacctccacaacagggaccacctccacctccaggccccttt
ccacctcgcccacctggtcctcttgggccaccccttacacttgctcctcctccgcatctt
cctggaccacctccaggtgccccaccaccagctccacatgtgaacccagctttctttcct
ccaccgactaacagcggcatgcctacatcagatagtcggggtccaccaccaacagatcca
tatggccgacccccaccatatgataggggtgactatggtcctcctggaagggaaatggat
actgcaagaacgccattgagtgaagctgagtttgaagaaatcatgaatagaaatagggca
atctcaagcagtgctatttcaagagctgtgtctgatgccagtgctggtgattatgggagt
gctattgagacattggtgactgcaatttctttaattaaacaatccaaagtatctgctgat
gatcgttgcaaagttctcattagctctttgcaagattgccttcatggaattgaatccaag
tcttatggttctggatcaagaagacgtgaacgatcaagagagagggaccatagtagatca
cgagaaaagagtcggcgtcataaatcccgtagtagagatcgtcatgatgattattataga
gagagaagcagagagcgagagagacaccgggaccgggaccgagatcgggaccgagaacgg
gaccgagaacgcgagtatcgtcatcgttag
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