KEGG   Ursus maritimus (polar bear): 103657060
Entry
103657060         CDS       T03271                                 
Symbol
SYMPK
Name
(RefSeq) symplekin
  KO
K06100  symplekin
Organism
umr  Ursus maritimus (polar bear)
Pathway
umr03015  mRNA surveillance pathway
umr04530  Tight junction
Brite
KEGG Orthology (KO) [BR:umr00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    103657060 (SYMPK)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    103657060 (SYMPK)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:umr03021]
    103657060 (SYMPK)
   03019 Messenger RNA biogenesis [BR:umr03019]
    103657060 (SYMPK)
Transcription machinery [BR:umr03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     103657060 (SYMPK)
Messenger RNA biogenesis [BR:umr03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     103657060 (SYMPK)
    U7-dependent histone pre-mRNA processing factors
     103657060 (SYMPK)
SSDB
Motif
Pfam: Symplekin_C SYMPK_PTA1_N PDS5 Cnd1 Cohesin_HEAT INTS7_N
Other DBs
NCBI-GeneID: 103657060
NCBI-ProteinID: XP_008682693
UniProt: A0A384BJB9
LinkDB
Position
Unknown
AA seq 1272 aa
MAGNSGDSVTRRSVASQFFTQEEGPGIDGMTTSERVVDLLNQAALITNDSKITVLKQVQE
LIINKDPTLLDNFLDEIIAFQADKSIEVRKFVIGFIEEACKRDIELLLKLIANLNMLLRD
ENVNVVKKAILTMTQLYKVALQWMVKSRVISELQEACWDMVSAMAADIILLLDSDNDGIR
THAIKFVEGLIVTLSPRMPDSEVPRRQEHDISLDRIPRDHPYIQYNMLWEEGKAALEQLL
KFMVHPAISSINLTTALGSLANIARQRPMFMSEVIQAYETLHANLPPTLAKSQVSSVRKN
LKLHLLSVLKHPASLEFQAQITTLLVDLGTPQAEIARNMPSAKDARKRPRDDADSTLKKM
KLEPNLGEDDEDKDLEPGPSGTSKASAQISGQSDTDITAEFLQPLLTPDNVANLVLISMV
YLPEAMPASFQAIYTPVESAGTEAQIKHLARLMATQMTAAGLGPGVEQTKQCKEEPKEEK
VVKPESVLIKRRLSAQGQAISVVGSLSSMSALEEEAPQAKRRPEPIIPVTQPRLAGAGGR
KKIFRLSDVLKPLTDAQVEAMKLGAVKRILRAEKAVACSGAAQVRIKILASLVTQFDSGL
KAEVLSFILEDVRARLDLAFAWLYQEYNAYLAAGASGTLDKYEDCLIRLLSGLQEKPDQK
DGIFTKVVLEAPLITESALEVIRKYCEDESRTYLGMSTLRDLIFKRPSRQFQYLHVLLDL
SSHEKDKVRSQALLFIKRMYEKEQLREYVEKFALNYLQLLVHPNPPSVLFGADKDTEVAA
PWTEETVKQCLYLYLALLPQNHKLIHELAAVYTEAIADIKRTVLRVIEQPIRGMGMNSPE
LLLLVENCPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGLEK
KEVIQALPKLIKLNPIVVKEVFNRLLGTQHGEGNSALSPLNPGELLIALHNIDSVKCDMK
SIIKATNLCFAERNVYTSEVLAVVMQQLMEQSPLPMLLMRTVIQSLTMYPRLGGFVMNIL
SRLIMKQVWKYPKVWEGFIKCCQRTKPQSFQVILQLPPQQLGAVFDKCPELREPLLAHVR
SFTPHQQAHIPNSIMTILEASGKQEPEAKEVPAGPLEEDDLEPLALAPAPAPRPPQDLIG
LRLAQEKALKRQLEEEQKLKPGGVGAPLSSSSSSSSTRPGPPQPEEAIDFREEGPECETP
AIFISMDDDSGLTEAALLDSSLEGPLPKEAAGGLTSKEERSPQTLTPAGEDTMKTPSPAN
EESGEPETKGNS
NT seq 3819 nt   +upstreamnt  +downstreamnt
atggcaggcaacagtggagatagtgtcactcggcggagcgtggcgtcgcagttcttcaca
caagaggaggggccgggcattgatggcatgaccacctcagagagagtggtggatctcctg
aaccaggcagcactgatcaccaatgattcaaagatcacagtactcaagcaggtccaggaa
ctgatcatcaacaaagatcctacactattagacaacttcctggacgagatcatcgctttc
caggcggacaagtcgatcgaagtgcgcaaatttgtcatcggcttcatcgaggaggcatgc
aagcgagacattgagttactgctgaaactgatcgcaaacctcaacatgctcctgagggat
gagaatgtgaatgtggtgaagaaggccatcctcaccatgacccagctctacaaggtggcc
ttgcagtggatggtaaagtcacgagtcatcagtgagctccaggaggcctgctgggacatg
gtgtctgccatggctgcggacatcattctgctgctggattctgacaatgacggcatccgc
acccatgccatcaagtttgtggagggtctcatcgtcaccttgtcgccccgcatgcctgac
tcggaggtgccccgacgccaggagcatgacatcagcctagaccgcatccctcgtgaccac
ccctatatccagtacaatatgctgtgggaagaaggcaaagcggctttggagcagctgctc
aagttcatggtacaccccgccatctcctccatcaacctgaccacagcgctgggctccctt
gccaacatcgcccgccagaggcccatgttcatgtcagaggtgatccaggcctacgaaacc
ctgcatgccaacctgcccccgacgctggccaaatctcaggtgagcagtgtgcgcaagaac
ctcaagctgcacctgctgagtgtcctgaagcacccggcctccttggagttccaggcccag
atcaccaccctgctggtggacctgggcacgcctcaggcggagatagcccgcaacatgccc
agtgccaaggatgcccgcaagcggccccgtgacgatgcggattccacgctcaagaagatg
aagctggagcccaacctgggggaagacgatgaggacaaggacttggagccaggcccgtcg
ggaacctcaaaggcctcagcccagatctcaggccagtcagacacagacatcacagccgag
ttcctgcagcccttgctgacacccgacaatgtggccaatctggtcctcatcagcatggtg
tatctgcccgaggccatgcctgcctccttccaagccatctacaccccagtggagtctgca
ggcaccgaagcccagatcaagcacctggctcggctcatggccacacagatgacggctgcg
ggactggggccaggtgtggagcagaccaaacagtgcaaggaggagcccaaggaggagaag
gtggtgaagccagagagtgtcctgatcaagcgacgcctgtctgcccagggccaggccatc
tcagtggtgggctccctgagctccatgtctgctctggaggaggaggcgccccaggccaag
aggaggccggagcccatcatccctgtcacgcagccccggctggcgggtgctggtgggcgc
aagaaaatcttccgcctgagcgatgtgctgaagcccctgacggacgcccaggtggaggct
atgaagctgggtgccgtgaagcggatcctgcgggcggagaaggctgtggcctgcagcggg
gcggcccaggtgcgcataaagatcctggccagcctggtgacgcagtttgactcgggcctg
aaggccgaggtcctgtccttcatcctggaggatgtgcgggcccgcctggacttggccttc
gcctggctctaccaggagtacaatgcctacctggcagccggtgcctcgggcaccctggac
aagtatgaggactgcctcatccgcctgctctccggactgcaggagaagccggaccagaag
gatgggatcttcactaaggttgtgctcgaggcgccgctgatcaccgagagtgccctggag
gtgattcgcaagtactgtgaggatgagagtcgcacttacctgggcatgtccactcttcga
gacctgatcttcaagcgcccatcccgccagttccagtacctgcatgttctgctggacctc
agctcccatgagaaagacaaggtgcgttcccaggccctactgttcatcaagcgcatgtat
gagaaggagcagctgcgagagtatgtggaaaaatttgccctcaactacctgcaactcctg
gtccaccccaacccgccgtccgtgctgtttggagccgacaaggatacagaggtggcagcg
ccctggaccgaggagaccgtaaagcagtgtctgtacctctacctggctctcctgcctcag
aaccacaagctcatccacgaactggcagctgtgtacacggaggccatcgccgacatcaag
cggacggtgctgagggtcatcgaacagccgatccgaggaatgggcatgaactcaccagag
ctgctcctgctggtagaaaactgtcccaagggggcagagacactggtcacacgatgtctg
cacagcctcacagacaaagtccccccctccccagagctggtgaagcgggtccgggatctc
taccacaagcgattgccagatgtccgcttcctcatccctgtgctcaatggactggagaag
aaagaagtgatccaggccctgccaaagctcatcaaactcaaccccattgtggtgaaagag
gtcttcaaccgcctgctgggcacccagcatggtgaagggaactcggccttgtccccgctg
aaccctggagagctgctgatcgcactgcacaacatcgactcggtgaagtgtgatatgaag
tccatcatcaaagccaccaacctgtgctttgcggagcggaacgtgtacacatcggaggtg
ctggccgtggtgatgcagcagctgatggagcagagccccctgcccatgctgctcatgagg
accgtcatccagtctctgaccatgtacccccgcctggggggcttcgtcatgaacatcctg
tcccgcctcatcatgaagcaggtgtggaagtatcccaaggtgtgggagggcttcatcaag
tgctgtcaacgcaccaagccccagagcttccaggtcatcctgcagttgccaccccagcag
ctgggcgccgtctttgacaagtgcccagagctccgggagcccctgctggcccacgtccga
tccttcaccccccaccagcaagcacacatccccaactccatcatgaccatcctggaggcc
agtggcaagcaggagccagaggccaaggaagtgcctgcggggcccctggaagaggacgac
ctggagcccttggccctggccccggccccagccccccgcccccctcaggacctcatcggc
ttgcgactggcccaggagaaagccttaaagcgtcagctggaggaggaacagaagctgaag
ccaggaggagtgggagcccccttgtcgtcgtcctcgtcctcttcctccacccggccaggc
cctccccagcccgaagaagccatagatttccgggaggaggggcctgagtgtgagaccccc
gccatcttcatcagcatggatgacgactcggggctgaccgaggccgccctcctggactct
agtcttgaggggcccctacctaaggaggcagcgggcgggttgacctcaaaggaggagcgc
agcccccagaccctcacccctgccggagaagacaccatgaagacccccagccccgccaac
gaggaatccggggaacccgagaccaaggggaacagctga

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