Ursus maritimus (polar bear): 103657060
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Entry
103657060 CDS
T03271
Symbol
SYMPK
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
umr
Ursus maritimus (polar bear)
Pathway
umr03015
mRNA surveillance pathway
umr04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
umr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103657060 (SYMPK)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
103657060 (SYMPK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
umr03021
]
103657060 (SYMPK)
03019 Messenger RNA biogenesis [BR:
umr03019
]
103657060 (SYMPK)
Transcription machinery [BR:
umr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103657060 (SYMPK)
Messenger RNA biogenesis [BR:
umr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
103657060 (SYMPK)
U7-dependent histone pre-mRNA processing factors
103657060 (SYMPK)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
PDS5
Cnd1
Cohesin_HEAT
INTS7_N
Motif
Other DBs
NCBI-GeneID:
103657060
NCBI-ProteinID:
XP_008682693
UniProt:
A0A384BJB9
LinkDB
All DBs
Position
Unknown
AA seq
1272 aa
AA seq
DB search
MAGNSGDSVTRRSVASQFFTQEEGPGIDGMTTSERVVDLLNQAALITNDSKITVLKQVQE
LIINKDPTLLDNFLDEIIAFQADKSIEVRKFVIGFIEEACKRDIELLLKLIANLNMLLRD
ENVNVVKKAILTMTQLYKVALQWMVKSRVISELQEACWDMVSAMAADIILLLDSDNDGIR
THAIKFVEGLIVTLSPRMPDSEVPRRQEHDISLDRIPRDHPYIQYNMLWEEGKAALEQLL
KFMVHPAISSINLTTALGSLANIARQRPMFMSEVIQAYETLHANLPPTLAKSQVSSVRKN
LKLHLLSVLKHPASLEFQAQITTLLVDLGTPQAEIARNMPSAKDARKRPRDDADSTLKKM
KLEPNLGEDDEDKDLEPGPSGTSKASAQISGQSDTDITAEFLQPLLTPDNVANLVLISMV
YLPEAMPASFQAIYTPVESAGTEAQIKHLARLMATQMTAAGLGPGVEQTKQCKEEPKEEK
VVKPESVLIKRRLSAQGQAISVVGSLSSMSALEEEAPQAKRRPEPIIPVTQPRLAGAGGR
KKIFRLSDVLKPLTDAQVEAMKLGAVKRILRAEKAVACSGAAQVRIKILASLVTQFDSGL
KAEVLSFILEDVRARLDLAFAWLYQEYNAYLAAGASGTLDKYEDCLIRLLSGLQEKPDQK
DGIFTKVVLEAPLITESALEVIRKYCEDESRTYLGMSTLRDLIFKRPSRQFQYLHVLLDL
SSHEKDKVRSQALLFIKRMYEKEQLREYVEKFALNYLQLLVHPNPPSVLFGADKDTEVAA
PWTEETVKQCLYLYLALLPQNHKLIHELAAVYTEAIADIKRTVLRVIEQPIRGMGMNSPE
LLLLVENCPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGLEK
KEVIQALPKLIKLNPIVVKEVFNRLLGTQHGEGNSALSPLNPGELLIALHNIDSVKCDMK
SIIKATNLCFAERNVYTSEVLAVVMQQLMEQSPLPMLLMRTVIQSLTMYPRLGGFVMNIL
SRLIMKQVWKYPKVWEGFIKCCQRTKPQSFQVILQLPPQQLGAVFDKCPELREPLLAHVR
SFTPHQQAHIPNSIMTILEASGKQEPEAKEVPAGPLEEDDLEPLALAPAPAPRPPQDLIG
LRLAQEKALKRQLEEEQKLKPGGVGAPLSSSSSSSSTRPGPPQPEEAIDFREEGPECETP
AIFISMDDDSGLTEAALLDSSLEGPLPKEAAGGLTSKEERSPQTLTPAGEDTMKTPSPAN
EESGEPETKGNS
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcaacagtggagatagtgtcactcggcggagcgtggcgtcgcagttcttcaca
caagaggaggggccgggcattgatggcatgaccacctcagagagagtggtggatctcctg
aaccaggcagcactgatcaccaatgattcaaagatcacagtactcaagcaggtccaggaa
ctgatcatcaacaaagatcctacactattagacaacttcctggacgagatcatcgctttc
caggcggacaagtcgatcgaagtgcgcaaatttgtcatcggcttcatcgaggaggcatgc
aagcgagacattgagttactgctgaaactgatcgcaaacctcaacatgctcctgagggat
gagaatgtgaatgtggtgaagaaggccatcctcaccatgacccagctctacaaggtggcc
ttgcagtggatggtaaagtcacgagtcatcagtgagctccaggaggcctgctgggacatg
gtgtctgccatggctgcggacatcattctgctgctggattctgacaatgacggcatccgc
acccatgccatcaagtttgtggagggtctcatcgtcaccttgtcgccccgcatgcctgac
tcggaggtgccccgacgccaggagcatgacatcagcctagaccgcatccctcgtgaccac
ccctatatccagtacaatatgctgtgggaagaaggcaaagcggctttggagcagctgctc
aagttcatggtacaccccgccatctcctccatcaacctgaccacagcgctgggctccctt
gccaacatcgcccgccagaggcccatgttcatgtcagaggtgatccaggcctacgaaacc
ctgcatgccaacctgcccccgacgctggccaaatctcaggtgagcagtgtgcgcaagaac
ctcaagctgcacctgctgagtgtcctgaagcacccggcctccttggagttccaggcccag
atcaccaccctgctggtggacctgggcacgcctcaggcggagatagcccgcaacatgccc
agtgccaaggatgcccgcaagcggccccgtgacgatgcggattccacgctcaagaagatg
aagctggagcccaacctgggggaagacgatgaggacaaggacttggagccaggcccgtcg
ggaacctcaaaggcctcagcccagatctcaggccagtcagacacagacatcacagccgag
ttcctgcagcccttgctgacacccgacaatgtggccaatctggtcctcatcagcatggtg
tatctgcccgaggccatgcctgcctccttccaagccatctacaccccagtggagtctgca
ggcaccgaagcccagatcaagcacctggctcggctcatggccacacagatgacggctgcg
ggactggggccaggtgtggagcagaccaaacagtgcaaggaggagcccaaggaggagaag
gtggtgaagccagagagtgtcctgatcaagcgacgcctgtctgcccagggccaggccatc
tcagtggtgggctccctgagctccatgtctgctctggaggaggaggcgccccaggccaag
aggaggccggagcccatcatccctgtcacgcagccccggctggcgggtgctggtgggcgc
aagaaaatcttccgcctgagcgatgtgctgaagcccctgacggacgcccaggtggaggct
atgaagctgggtgccgtgaagcggatcctgcgggcggagaaggctgtggcctgcagcggg
gcggcccaggtgcgcataaagatcctggccagcctggtgacgcagtttgactcgggcctg
aaggccgaggtcctgtccttcatcctggaggatgtgcgggcccgcctggacttggccttc
gcctggctctaccaggagtacaatgcctacctggcagccggtgcctcgggcaccctggac
aagtatgaggactgcctcatccgcctgctctccggactgcaggagaagccggaccagaag
gatgggatcttcactaaggttgtgctcgaggcgccgctgatcaccgagagtgccctggag
gtgattcgcaagtactgtgaggatgagagtcgcacttacctgggcatgtccactcttcga
gacctgatcttcaagcgcccatcccgccagttccagtacctgcatgttctgctggacctc
agctcccatgagaaagacaaggtgcgttcccaggccctactgttcatcaagcgcatgtat
gagaaggagcagctgcgagagtatgtggaaaaatttgccctcaactacctgcaactcctg
gtccaccccaacccgccgtccgtgctgtttggagccgacaaggatacagaggtggcagcg
ccctggaccgaggagaccgtaaagcagtgtctgtacctctacctggctctcctgcctcag
aaccacaagctcatccacgaactggcagctgtgtacacggaggccatcgccgacatcaag
cggacggtgctgagggtcatcgaacagccgatccgaggaatgggcatgaactcaccagag
ctgctcctgctggtagaaaactgtcccaagggggcagagacactggtcacacgatgtctg
cacagcctcacagacaaagtccccccctccccagagctggtgaagcgggtccgggatctc
taccacaagcgattgccagatgtccgcttcctcatccctgtgctcaatggactggagaag
aaagaagtgatccaggccctgccaaagctcatcaaactcaaccccattgtggtgaaagag
gtcttcaaccgcctgctgggcacccagcatggtgaagggaactcggccttgtccccgctg
aaccctggagagctgctgatcgcactgcacaacatcgactcggtgaagtgtgatatgaag
tccatcatcaaagccaccaacctgtgctttgcggagcggaacgtgtacacatcggaggtg
ctggccgtggtgatgcagcagctgatggagcagagccccctgcccatgctgctcatgagg
accgtcatccagtctctgaccatgtacccccgcctggggggcttcgtcatgaacatcctg
tcccgcctcatcatgaagcaggtgtggaagtatcccaaggtgtgggagggcttcatcaag
tgctgtcaacgcaccaagccccagagcttccaggtcatcctgcagttgccaccccagcag
ctgggcgccgtctttgacaagtgcccagagctccgggagcccctgctggcccacgtccga
tccttcaccccccaccagcaagcacacatccccaactccatcatgaccatcctggaggcc
agtggcaagcaggagccagaggccaaggaagtgcctgcggggcccctggaagaggacgac
ctggagcccttggccctggccccggccccagccccccgcccccctcaggacctcatcggc
ttgcgactggcccaggagaaagccttaaagcgtcagctggaggaggaacagaagctgaag
ccaggaggagtgggagcccccttgtcgtcgtcctcgtcctcttcctccacccggccaggc
cctccccagcccgaagaagccatagatttccgggaggaggggcctgagtgtgagaccccc
gccatcttcatcagcatggatgacgactcggggctgaccgaggccgccctcctggactct
agtcttgaggggcccctacctaaggaggcagcgggcgggttgacctcaaaggaggagcgc
agcccccagaccctcacccctgccggagaagacaccatgaagacccccagccccgccaac
gaggaatccggggaacccgagaccaaggggaacagctga
DBGET
integrated database retrieval system