Entry |
|
Symbol |
COL9A1
|
Name |
(RefSeq) collagen alpha-1(IX) chain
|
KO |
|
Organism |
umr Ursus maritimus (polar bear)
|
Pathway |
umr04974 | Protein digestion and absorption |
|
Brite |
KEGG Orthology (KO) [BR:umr00001]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
103657380 (COL9A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103657380 (COL9A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103657380 (COL9A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103657380 (COL9A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
103657380 (COL9A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
103657380 (COL9A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:umr00535]
103657380 (COL9A1)
Proteoglycans [BR:umr00535]
Extracellular matrix (ECM) proteoglycans
Others
103657380 (COL9A1)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
Unknown
|
AA seq |
921 aa
MKNFWKIPVFFFVCSFLGSWASAAVKRRPRFPVNSNSNGENELCPKVRIGQDDLPGFDLI
SQFQIDKAASRRAIQRVVGSTALQVAYKLGNNVDFRIPTRNLYPSGLPEEYSFLTTFRMT
GGTLEKNWSIWQIQDSSGKEQVGVKINGQTKSVAFSYKGLDGNLQTVTFPNLPSLFDSQW
HKIMIGVERSSATLFVDCNRIQSLPIKPRGQIDVDGFAVLGKLADNPQVSVPFELQWMLI
HCDPLRPRRETCHELPVRITPSETTDQRGPPGEQGPPGPPGPPGVPGIDGIDGDRGPKGP
PGPPGPAGEPGKPGAPGKPGTPGADGLTGPDGSPGSVGPRGQKGEPGVPGSRGFPGRGIP
GPPGPPGAAGLPGELGRVGPIGDPGRRGPPGPPGPPGPSGAIGFHEGDPLCPNSCPPGRS
GYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGAK
GEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEIGPKGDRGPQGSRGIPGLPGTKGDTGLP
GVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGVPGAKGIAGEKGNTGAPGKPGQL
GNSGKPGQQGPPGEVGPRGPRGLPGSRGEIGPVGPPGPPGKLGSPGSPGLPGLPGPPGLP
GMKGDRGAVGEPGPKGEQGSSGEEGEAGERGELGEIGLPGPKGSVGNPGEPGLRGPEGSR
GLPGVEGPRGPPGPRGVQGEQGATGLPGIEGPPGRAPTDQHIKQVCMRVMQEHLAEMAAS
LKRPDSGASGLPGRPGPPGPPGPPGENGFPGQMGLRGLPGIKGPPGALGLRGPKGDLGER
GERGPPGRGPKGLPGATGLPGEPGPASYGRNGRDGERGPPGVAGIPGVPGPPGPPGPPGF
CEPASCTLQAGQRAFSKGPDQ |
NT seq |
2766 nt +upstreamnt +downstreamnt
atgaagaacttttggaaaattccagttttcttctttgtgtgcagtttcctgggatcttgg
gcatctgcagctgtcaagcgtcgcccaaggttccctgttaattcaaattcgaatggtgaa
aatgaactctgtccaaaggtcaggattggccaagatgatttaccaggctttgacttgatt
tctcagttccagatagataaagcagcatctagaagagctattcagagggtagtgggatca
actgcattacaagtggcttacaaattgggaaataatgtagacttcaggattccaacaagg
aatttatatcccagtggtctgcctgaagaatactcctttttaactacttttcggatgact
ggaggcacacttgaaaagaactggagcatttggcagattcaggattcctcagggaaggag
caagttggcgtgaagattaatggccaaacaaaatctgttgcattttcatacaagggactg
gatggaaatctccagactgtaacctttccaaatctgccttccttatttgattcccagtgg
cataagatcatgattggtgtggaaaggagtagtgctactctttttgttgattgcaacagg
attcaatccttacctataaagccaagaggccaaatcgatgttgatggctttgctgtgctg
ggaaaacttgcagataatcctcaagtttctgttccgtttgaacttcagtggatgctgatc
cattgtgacccactacgccccaggagagaaacttgccatgagctgccagtccgaataact
cccagtgagaccaccgaccagagaggtcccccgggcgagcaggggcccccggggcccccg
ggcccccctggagttccaggcatcgatggtatcgacggtgaccgaggtccaaagggtccc
ccgggccctccgggtcctgctggagaaccgggcaagccaggagctccgggcaagccgggc
acgccgggcgccgacggattaacaggacctgatggatcccctggttctgttggaccaaga
ggacaaaaaggagaacccggtgttcctggatctcgtggatttccaggccgtggtattcct
gggccccctggtccccctggggcagcaggactccctggagagcttggccgtgttggacca
attggtgaccctgggagaagaggaccacctggcccccctggccctccgggacccagtgga
gcaattggctttcatgaaggcgatccattgtgtcccaattcctgtccaccaggccgctca
ggatatccaggcttaccaggcatgaggggtcataaaggggctaaaggagaaattggtgaa
cccggaagacagggtcacaagggtgaagaaggtgaccagggggaactgggagaagttgga
gctcaaggacctccgggagctcaaggattacgaggcatcactggcatagttggggccaaa
ggggaaaaaggtgctcggggcttagatggagaacctgggcctcagggtcttcctggtgca
cctggtgatcaaggacagagaggacctccaggagaaataggtcccaagggagatagaggg
cctcaaggttctagaggaattcctggcctccctgggaccaaaggagacacgggcttgcca
ggtgtggatggccgtgacgggatacctggaatgccaggaacaaagggtgaaccggggaag
cctgggcctcctggtgatgcaggattgcagggcttacctggtgtacctggggttcctggt
gcaaagggtattgctggtgaaaagggtaacacaggtgctccagggaagcctggtcagctg
gggaattcaggcaaaccgggccaacaggggccgccaggagaggtgggaccccgaggaccc
cgggggcttcctggcagcagaggagaaataggaccagtgggacctccaggaccaccaggt
aaactgggttctcctggtagtcctggcctccctggcttgcctggcccccctggccttcct
ggaatgaaaggtgacaggggagcagtcggtgaacctgggccaaagggtgaacagggttcc
tccggtgaagaaggtgaagcaggagaaaggggcgaacttggagaaataggattacctggg
ccaaagggatctgtgggtaaccctggggagcccggcttgagagggcctgaaggaagtcgg
gggcttcctggagtggaaggaccaagaggaccgcctggaccacgaggcgtgcagggagag
cagggtgccaccggcctgcctggcatcgagggccctccaggtagagcaccgacagatcag
cacattaagcaggtttgcatgagagtcatgcaagagcaccttgctgagatggctgctagt
ctcaagcgaccggactcaggagcctctggcctccctggtcggcctggcccccctggcccc
ccaggaccacctggagagaatggtttcccaggccagatgggactgcgtggcctcccaggc
attaaaggcccccctggtgctcttggtttaagggggcctaaaggtgacttgggagaaagg
ggggaacgaggccctccaggaagaggtcctaagggcttgcccggagctacaggtctccca
ggtgaaccaggtcctgccagctacgggaggaatggccgggatggcgagcgaggcccccca
ggggtggcaggaattcccggggtacctggccccccgggccctcctggccctcctgggttt
tgtgagccagcctcctgcaccctgcaggctgggcaacgggcctttagcaaagggcccgat
cagtga |