KEGG   Ursus maritimus (polar bear): 103658565
Entry
103658565         CDS       T03271                                 
Symbol
WDR33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X1
  KO
K15542  polyadenylation factor subunit 2
Organism
umr  Ursus maritimus (polar bear)
Pathway
umr03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:umr00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    103658565 (WDR33)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:umr03019]
    103658565 (WDR33)
Messenger RNA biogenesis [BR:umr03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     103658565 (WDR33)
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_EML WDR55 EIF3I Beta-prop_IFT140_1st Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_EIPR1 Collagen WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_Vps41 Beta-prop_IFT122_1st eIF2A WD40_RFWD3 Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_WDR11_2nd Ge1_WD40 PEP5_VPS11_N
Other DBs
NCBI-GeneID: 103658565
NCBI-ProteinID: XP_008684280
UniProt: A0A384BQ84
LinkDB
Position
Unknown
AA seq 1336 aa
MATEIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIKYLENRIWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
VGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYDDLEPNSLAVIPGMGIPEQLKLAMEQEQMGKDESNEIEMTIPGLDWGMEE
VMQKDQKKVPQKKVPYAKPIPAQFQQAWMQNKVPIPAPNEVLNDRKEDIKLEEKKKTQAE
IEQEMATLQYTNPQLLEQLKIERLAQKQAEQIQPPPSSGTPLLGPQPFPGQGPMSQIPQG
FQQPHPSQQMPMNMAQMGPPGPQGQFRPPGPQGQMGPQGPPLHQGGGGPQGFMGPQGPQG
PPQGLPRPQDMHGPQGMQRHPGPHGPLGPQGPPGPQGNSGPQGHMGPQGPPGPQGHIGPQ
GPPGPQGHLGPQGPPGTQGMQGPPGPRGMQGPPHPHGIQGGPGSQGIQGPVSQGPLMGLN
PRGMQGPPGPRENQGPAPQGMMMGHPPQEMRGPHPPSGLLGHGPQEMRGPQEMRGMQGPP
AQGSMLGPPQELRGPPGSQGQQGPPQGSLGPPPQGGMQGPPGPQGQQNPARGPHPSQGPI
PFQQQKTALLGDGPRAPFNQEGQNAGPPPLIPGLGQQGAQGRIPPLNPGQGPGPNKGDSR
GPPNHHMGPMSERRHEQSSGPEHGPERGPFRGGQDCRGPPDRRGPHPDFPDDFSRPDDFH
PDKRFGHRLREFEGRGGPLPQEEKWRRGGPGPPFPPDHREFSEGDGRGAARGPPGAWEGR
RPGDERFPRDPEDPRFRGRREESFRRGAPPRHEGRAPPRGRDSFPGPEDFGPEENFDPSD
EAARGRDLRGRGRGTPRGGRKGLLPTPDEFPRFEGGRKPDSWDGNREPGPGHEHFRDAPR
PDHPPHDGHSPASRERSSSLQGMDMASLPPRKRPWHDGPGTSEHREMEAPGGPSEDRGGK
GRGGPGPSQRVPKSGRSSSLDGDHHDGYHRDEPFGGPPGSSTASRGGRSGSNWGRGSNMN
SGPPRRGASRGGGRGR
NT seq 4011 nt   +upstreamnt  +downstreamnt
atggctacagaaattggttctcctcctcgttttttccatatgccaaggttccaacaccaa
gcacctcgacaactattttataagcgacctgattttgcacagcagcaagcaatgcaacag
cttacctttgatggaaaacggatgagaaaagcagtaaaccgaaaaaccatagactataat
ccgtctgtaattaagtatttggagaatagaatatggcaaagagaccagagagatatgcgg
gcaattcagcctgatgcaggttattataatgatctggtcccacctatagggatgttgaat
aatcctatgaatgcagtaacaacaaaatttgttcgaacatcaacaaataaagtcaagtgt
ccagtatttgttgttaggtggactccagaaggaagacggttggtcactggagcttctagt
ggagagttcaccttgtggaatggactcaccttcaattttgaaacaatattacaggctcat
gatagcccagtgagggccatgacttggtcacataatgacatgtggatgttgacagcagac
catggaggatatgtgaaatattggcagtcgaacatgaacaacgtcaagatgttccaggca
cataaggaggcgattagagaggccagtttctcacccacggataataaatttgctacatgc
tctgatgacggcactgttagaatctgggactttcttcgttgccatgaggaaagaattctc
cgagggcatggtgcagatgtgaaatgtgtagactggcatccaacaaaagggttagttgtt
tcaggaagtaaagatagtcaacagccaatcaagttctgggatcccaagactgggcagagt
cttgcaacactccatgcccataaaaacacagtaatggaagtgaaattaaatctcaatggc
aactggctactcactgcatcacgtgaccacctctgtaaactttttgatatccgaaacctg
aaagaagagcttcaagtcttccgaggtcataagaaagaagccacagctgtggcctggcat
cctgttcatgaaggactttttgccagtggagggtccgatggctctttgttattctggcat
gttggggtagagaaggaagtgggtgggatggagatggcccatgaaggaatgatctggagt
ctggcttggcatcctcttggacatattctctgctctggttcaaatgaccatactagcaaa
ttctggacccgaaaccgaccaggtgataaaatgcgagatcgatataatctcaacctattg
cctggaatgtctgaagatggagtggaatatgatgaccttgaacctaatagcctggcagta
attccaggaatgggaataccagaacaactaaaattagctatggaacaagagcagatgggg
aaagatgaatcaaatgaaattgaaatgacaattccaggtttggactggggaatggaggag
gtgatgcaaaaggatcagaaaaaagttcctcagaaaaaagttccttatgcaaaacctatt
cctgctcagttccagcaggcttggatgcaaaataaagttccaattcctgccccaaatgag
gtactaaatgatagaaaagaggacattaaattggaagagaagaagaaaacgcaagcagaa
attgaacaagaaatggccacattacagtataccaacccacagcttctggagcaacttaaa
attgaaagacttgcacagaaacaggctgagcaaattcagcctcctccttcatctggcacc
cctctcctcggaccccagccctttccaggacaaggtccaatgtctcagattcctcaaggt
tttcagcagccccatccatctcagcagatgccaatgaacatggctcaaatggggcctcca
ggtccacagggacagtttagaccccctggaccccagggacaaatgggaccacaaggtcct
ccactgcatcagggaggtggggggccacaaggattcatgggaccacaagggccccagggc
ccgccccaggggttgccgaggcctcaggacatgcatgggccccaaggaatgcagaggcac
cctggacctcatggccctttgggacctcaaggaccgcctggaccacagggtaattctggt
cctcaaggtcatatgggtcctcagggtccacctggcccacaaggtcatataggccctcaa
ggcccacctggtccccagggtcacttgggccctcaggggcctcctggtactcaaggtatg
cagggaccacctggtcccagaggaatgcaaggacctcctcatcctcatgggatacaaggt
gggccagggtctcaagggatccaaggtcctgtgtctcagggacctctgatgggattgaat
ccaagaggaatgcagggtcctccaggcccccgagaaaatcagggtcctgctccccaaggg
atgatgatgggccatccgcctcaagagatgagaggacctcaccctccaagtggactgctg
ggacatggccctcaggagatgcgaggccctcaggagatgcgaggcatgcaggggcctcca
gcccaagggtccatgctgggccccccccaggaattgcgagggcctccaggctcacaaggt
cagcaggggccgccccagggctctttggggcctccaccccagggtggcatgcaagggccc
cctggacctcagggacagcagaacccggcaagagggccacatccatctcaagggccaata
ccattccagcagcagaaaacagctctgctaggtgatgggccccgggcccccttcaatcag
gaaggacagaacgcaggccccccacccctgataccaggcctagggcagcagggagcacaa
ggtcgcatcccccctcttaaccctggacaaggacctggccctaacaaaggtgactcacgt
ggccctccaaaccatcacatgggccccatgtcagagaggcggcatgagcagagcagcggc
cctgagcacgggcctgagagggggcctttccggggcggccaggactgcaggggtccccct
gataggcgtggccctcaccccgacttccctgacgacttcagcagaccagatgacttccac
ccggacaagcgctttggccaccgattacgtgaatttgaggggcgaggaggacctttacca
caagaagagaagtggaggcgtgggggccccgggcctccgtttccgcctgatcacagggaa
ttcagcgagggggatggccggggagcagcccggggccctccaggggcttgggaaggccgc
agacctggagatgaacgatttccccgggatcctgaggacccacgttttcgagggcgcaga
gaagaaagctttagaagaggagcacccccaagacatgagggccgtgccccccccagagga
agggacagttttcctggtcctgaagactttggtccggaggagaattttgatccttctgat
gaagcagcccgaggaagagatctcagaggtcgaggtcggggtaccccacgaggaggaagg
aagggtttactccccactcctgatgagttccctcgctttgaaggaggacggaaaccagac
tcctgggatggaaatagagagccaggaccaggtcacgagcatttccgtgatgctcctcgc
cctgatcatccccctcatgacggtcattccccagctagcagagaacgttcctcttctctc
cagggcatggacatggcatccctgccaccccgaaagcgtccctggcatgatgggccaggg
acctcggagcacagagaaatggaagccccagggggtccttctgaggatcgaggaggcaaa
ggccgagggggcccaggaccttcccagagagtgccaaaatccgggcgttccagctccttg
gatggagatcaccatgacggctaccacagagatgaaccttttgggggccctccaggcagc
agtactgcttccagagggggccggagtggcagtaactggggtagagggagtaacatgaac
tctggcccaccaaggcgaggagcttcaaggggtggtggaaggggtcggtag

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