Entry |
|
Symbol |
COL3A1
|
Name |
(RefSeq) collagen alpha-1(III) chain
|
KO |
K19720 | collagen type III alpha |
|
Organism |
umr Ursus maritimus (polar bear)
|
Pathway |
umr04933 | AGE-RAGE signaling pathway in diabetic complications |
umr04974 | Protein digestion and absorption |
|
Brite |
KEGG Orthology (KO) [BR:umr00001]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
103659663 (COL3A1)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
103659663 (COL3A1)
09152 Endocrine system
04926 Relaxin signaling pathway
103659663 (COL3A1)
09154 Digestive system
04974 Protein digestion and absorption
103659663 (COL3A1)
09160 Human Diseases
09174 Infectious disease: parasitic
05146 Amoebiasis
103659663 (COL3A1)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
103659663 (COL3A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
103659663 (COL3A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:umr00536]
103659663 (COL3A1)
Glycosaminoglycan binding proteins [BR:umr00536]
Heparan sulfate / Heparin
Extracellular matrix molecules
103659663 (COL3A1)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
Unknown
|
AA seq |
1466 aa
MMSFVQKGTWLLLALLHPTVILAQQQAVDGGCSHLGQSYADRDVWKPEPCQICVCDSGSV
LCDDIICDEQELDCPNPEIPFGECCAVCPQPPSAPPRPPNGHGPQGPKGDPGPPGIPGRN
GDPGIPGQPGSPGSPGPPGICESCPTGPQNYSPQFESYDVKAGVGGGGIAGYPGPAGPPG
PPGPPGTSGHPGSPGSPGYQGPPGEPGQAGPAGPPGPPGAIGPSGPAGKDGESGRPGRPG
ERGLPGPPGMKGPAGMPGFPGMKGHRGFDGRNGEKGDTGAPGLKGENGLPGENGAPGPMG
PRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPG
SSGSPGQRGEPGPQGHAGAPGPPGPPGSNGSPGGKGEMGPAGIPGAPGLMGARGPPGPSG
TNGAPGQRGAAGEPGKNGAKGEPGPRGERGEAGSPGIPGPKGEDGKDGSPGEPGANGLPG
AAGERGAPGFRGPAGANGLPGEKGPAGERGGPGPAGPRGAPGEPGRDGVPGGPGMRGMPG
SPGGPGSDGKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGPG
GPGPQGPAGKNGETGPQGPPGPTGPSGDKGDAGPPGPQGLQGLPGTSGPPGENGKPGEPG
PKGESGSPGTPGGKGDSGAPGERGPPGAVGPAGPRGGAGPPGPEGGKGAAGPPGPPGSAG
TPGLQGMPGERGGPGGPGPKGDKGEPGSSGADGAPGKDGPRGPTGPIGPPGPAGQPGDKG
EGGAPGLPGIAGPRGGPGERGEHGPPGPAGFPGAPGQNGEPGAKGERGAPGEKGEGGPPG
VAGPPGGAGPAGPPGPQGVKGERGSPGGPGAAGFPGGRGLPGPPGNNGNPGPPGSSGAPG
KDGPPGPPGSNGAPGSPGVSGPKGDSGQPGEKGSPGPQGPPGAPGPLGIAGITGARGLAG
PPGIPGPRGSPGPQGVKGESGKPGPAGHNGERGPPGPQGLPGLAGTAGEPGRDGNPGSDG
LPGRDGAPGGKGDRGENGSPGAPGAPGHPGPPGPVGPAGKNGDRGETGPAGPSGAPGPAG
SRGPAGPQGPRGDKGETGERGSTGIKGHRGFPGNPGAPGSPGPAGHQGAVGSPGPAGPRG
PVGPSGPPGKDGTSGHPGPIGPPGPRGNRGERGSEGSPGHPGQPGPPGPPGAPGPCCGAG
AAALGAIGGAEKAGGFAPYYGDEPMDFKINTEEIMTSLKSVNGQLESLISPDGSRKHPAR
NCRDLKFCHPELQSGEYWVDPNQGCKLDAIKVFCNMETGETCINASPLNVPRKNWWTDSG
AEKKHVWFGESMDGGFQFSYGNPELPEDVLDVQLAFLRLLSSRASQNITYHCKNSIAYMD
HASGNVKKALRLMGSNEGEFKAEGNSKFTYTVLEDGCTKHTGEWGKTVFEYQTRKAVRLP
IVDIAPYDIGGPDQEFGVDIGPVCFL |
NT seq |
4401 nt +upstreamnt +downstreamnt
atgatgagctttgtgcaaaaggggacctggttacttcttgctctgcttcatcccactgtt
attttggcacaacagcaagctgttgatggaggatgctcccatcttggacagtcctacgcg
gatagagatgtctggaagccagaaccttgccaaatatgcgtctgtgactcaggatctgtt
ctctgcgatgacataatatgtgatgaacaagaattagactgtcccaatccagaaatccca
ttcggagaatgttgcgcagtgtgcccccagcctccatcagctcctcctcgccctcctaat
ggtcatggacctcagggccctaagggagatccaggcccccctggtattcctgggagaaat
ggtgatcctggtattccaggacaaccaggttcccctggttctcctggcccccctggaatc
tgtgaatcatgccctactggtcctcagaactattctccccagtttgagtcatatgatgtc
aaggctggagtaggaggaggaggaatcgcaggctatcccgggccagctggtccccctggc
cctcccggtccccctggtacatccggtcatcctggctccccgggttctccaggataccaa
ggtccccccggtgaacctgggcaagctggtcctgcaggccctccaggaccccctggtgct
ataggtccatctggtcctgccggaaaagatggggaatcaggaagacccggacgacccgga
gagcgagggttgcctggacctccaggtatgaaaggtccagctggcatgcctggattccct
ggtatgaaaggacacagaggctttgatggacgaaatggagaaaagggtgatacaggcgct
cctggattaaagggtgaaaatggcctcccaggtgaaaatggagccccgggacccatgggt
cccagaggagctcctggtgagagaggacggccaggacttccaggagccgcgggggctcga
ggtaatgatggtgctcgcggaagtgatggacaaccaggcccccctgggccccctggaact
gcaggattccctggttcccctggtgctaagggtgaagttggacctgcgggatctcccggt
tcaagcggctccccgggacaaagaggagaacctggacctcagggccatgctggtgctcca
ggtcctcctggccctcctgggagcaatggtagtcctggtggcaaaggtgaaatgggtcct
gctggcattcctggagctcctggactgatgggagcccggggtcctcctggaccatctggt
accaacggtgcccctggacagcgaggtgctgcaggtgaacctggtaaaaatggtgccaaa
ggagagccagggccacgtggtgaacgtggcgaagctggttctccagggattccaggacct
aaaggtgaagacggcaaagatggttcgcctggagaacctggagcaaatggacttccagga
gctgcgggagaacggggtgcgcctggattccgagggcctgcaggagcaaacggccttcca
ggagaaaagggtcccgctggggagcgtggtggtcccggccccgcagggcccagaggagct
cctggagaacctggcagagatggtgtccctggaggtccaggaatgaggggtatgcccgga
agcccaggaggaccaggcagcgatgggaaaccagggcctcccggaagtcaaggagaaagt
ggtcgaccaggtcctccaggcccatctggtccccgaggtcagcctggtgtcatgggtttc
cctggacccaaagggaatgatggtgcgcctggcaagaatggagaacgaggtggccctgga
ggtcctggccctcagggtcctgctggaaagaatggtgaaactggacctcagggtccccca
ggacctactgggccatctggtgacaaaggagatgcaggaccccctggtccacaaggatta
caaggtttgcctggaaccagtggacctccaggagaaaatggaaaacctggcgaaccaggt
ccaaagggtgaatctggttcacctggaactccaggaggcaagggtgattcgggagccccg
ggcgaacgaggacctcccggagccgtggggcccgcgggacccagaggtggagctggtccc
cctggccctgaaggaggaaagggcgctgccggtccccctgggccacctgggtctgccggg
actcccggtctgcaagggatgcctggagaaagaggaggtcctggaggccccggcccgaag
ggtgacaagggtgaaccaggcagctcaggtgccgacggtgctccagggaaggacggtcca
aggggtcctactggtcccattggtccccctggcccagctggtcagcctggagataagggt
gaaggtggtgcccctgggcttccgggtatagctggtcctcgtggtggccctggtgagaga
ggcgaacatgggcctccaggacctgcgggcttccctggtgctcctggacagaatggtgag
cccggtgctaaaggagaaagaggtgctcctggtgagaaaggtgaaggagggccccctggc
gtcgcaggaccccctggaggtgctgggcctgctggtccccctggtccccagggcgtcaaa
ggtgaacgtggcagtcctggtggtcctggtgctgctggcttccctggtggtcgtggtctt
cctggtcctcctggtaataacggtaacccaggccccccgggctccagcggtgctccaggc
aaggatgggccccccggtccacctggtagcaatggtgctcctggcagccctggagtgtct
ggacctaaaggtgattctggccaacccggcgagaagggatcgcctggcccccagggccct
ccgggagctccaggtccactgggaattgctggtattactggagctaggggtctcgcagga
ccaccgggcatcccaggtcctaggggaagcccaggcccacagggcgtcaagggtgaaagt
gggaaaccaggacctgctggtcacaatggagaacgtggtcctcctggaccccagggtctt
cctggtctggctggtacagctggtgaacctggaagagatggaaacccagggtcagatggt
cttccaggccgagatggagctcctggtggcaaaggtgatcgtggagaaaacggctctcct
ggtgcccctggtgctcctggccatccaggcccccctggtcccgttggtcctgctggaaag
aatggtgacagaggagaaacgggccctgctggtccttctggtgctccaggtcctgctggt
tcccgaggtcctgctggtccccaaggtccacgtggtgacaaaggtgaaacaggtgaacgt
ggttctactggcatcaaaggacatcgaggcttccccggtaacccaggtgccccaggctcc
cctggtcctgctggtcaccaaggtgccgttggtagcccaggccccgcaggacccagggga
cctgttggacccagtgggccccctggcaaagatggaacaagtggacatccaggtcccatt
ggaccgccaggccctcgaggtaacagaggtgaaagaggatctgagggctccccaggccac
ccaggacaaccgggcccccctggacctcctggtgcccccggtccgtgctgtggcgctggg
gctgctgccctgggtgctattggaggagctgaaaaagctggtggttttgccccgtattat
ggcgatgaaccaatggatttcaaaatcaacaccgaggagattatgacttcactcaaatcg
gtcaatggacaactagaaagcctcattagtcctgatgggtctcgtaaacaccctgctcgc
aactgccgagacctgaaattctgccatcctgaactccagagtggagaatattgggttgat
cctaaccaaggttgcaagttggacgctattaaagtattctgcaatatggaaactggggaa
acgtgcataaatgccagtcctttgaacgttccacgtaagaactggtggacagattctggt
gctgagaagaaacatgtttggtttggagaatccatggatggtggttttcagtttagctat
ggcaatcctgaacttcctgaagatgtcctcgatgtccagctggcattcctccgacttctc
tccagccgggcttctcagaacatcacgtatcactgcaagaacagcattgcatacatggat
catgccagcggaaatgtaaagaaagccttgaggctgatggggtcaaatgaaggtgaattc
aaggctgaaggaaatagcaaattcacatacacagttctggaggatggttgcactaaacac
actggggaatggggcaaaacagtcttcgaataccaaacgcgcaaggccgtgagactacct
atcgtagatattgcaccctatgatattggtggtcctgatcaagaatttggtgtggacatt
ggccctgtttgctttttataa |