Entry |
|
Symbol |
CASC3
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Name |
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KO |
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Organism |
umr Ursus maritimus (polar bear)
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Pathway |
|
Brite |
KEGG Orthology (KO) [BR:umr00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103661726 (CASC3)
03015 mRNA surveillance pathway
103661726 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:umr03019]
103661726 (CASC3)
Messenger RNA biogenesis [BR:umr03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
103661726 (CASC3)
|
SSDB |
|
Motif |
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Other DBs |
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LinkDB |
|
Position |
Unknown
|
AA seq |
700 aa
MADRRRQRASQDTEDEESGASGSDSGGSPARGGGSCSGSAGGGGSGSLPSQRGGRAGALH
LRRVESGGAKSAEESECESEDGIEGDAVLSDYESAEDSEGEEGEYSEEENSKVELKSEAN
DAANSSAKEEKGEEKPDTKGTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRAYIP
RKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALYGYD
IRSAHNPDDIKPRRIRKPRFGSPPQRDPNWIVERPNKSHRHQGPGGTLPPRTFINRNAAG
TGRMSAPRNYSRSGGFKEGRAGFRPVDAGGQHGGRSGETVKHENSYRSRRLEQTPVRDPS
PEADAPVLGSPEKEEAASEVPAAAPDTAPPAPDRPVEKKSYSRARRTRIKAGDAVKVAED
VPPPPEGLNPAPQVPETTPPPPAKTGSWEAPVDSTTSGLEQDVAQLNITEQNWSPGQPSF
LQPRELRGMPNHIHMGAGPPPQFNRMEEMGVQGGRAKRYSSQRQRPVPEPPAPPVHISIM
EGHYYDPLQFQGPIYTHGDNPAPLPPQGMIVQPEMHLPHPGLHPHQTPAPLPNPGLYAPP
VSMSPGQPPPQQLLAPAYFSAPGVMNFGNPSYPYAPGALPPPPPPHLYPNTQAPSQVYGG
VTYYNPAQQQVQPKPSPPRRTPQPVTIKPPPPEVVSRGSS |
NT seq |
2103 nt +upstreamnt +downstreamnt
atggcggatcggcggcggcagcgcgcttcgcaggacacggaggacgaggagtctggtgct
tcgggctcagacagcggcggctccccggcgcggggcggcgggagctgcagcggtagcgcc
ggaggcggtggcagcggctctctgccttcccagcgcggaggccgagctggggcccttcat
ttgcggcgggtggagagcgggggcgctaagagcgccgaggagtcggaatgtgagagtgaa
gatggcatcgagggcgatgctgttctgtcggattatgaaagtgcagaagactctgaaggt
gaggaaggggaatacagtgaagaggaaaactccaaagtagagctgaaatcagaagccaat
gatgctgctaattcttcagcaaaagaagagaagggagaagaaaagcctgacaccaaaggc
actgtgactggagagaggcagagtggggatggacaggagagtacagaacctgtggagaac
aaagtgggtaaaaagggtcctaagcatttggatgatgatgaagatcgggcatacataccc
cggaaagggctcttctttgagcatgatcttcgagggcaaacgcaggaagaggaagtcaga
cccaaggggcgtcagcgaaagctgtggaaggatgagggtcgctgggagcatgacaaattc
cgggaagacgaacaagctccaaagtcccgacaggagctcattgccctttatggctatgac
atccgctcagctcacaatcctgacgacatcaaaccccgaagaatccggaaacccaggttt
gggagtcctccacaaagagatccaaactggattgttgagcggccaaacaagtcccatcgc
caccagggtcctgggggcaccctaccaccaaggacatttatcaacaggaatgctgcaggg
actggccgaatgtctgctcccaggaattactctcgatctgggggcttcaaggaaggtcgt
gctggttttaggcctgtggacgctggtgggcagcacggtggccggtctggtgagactgtt
aaacatgaaaacagttaccgatcacggcgcctcgagcagactcctgtgagggacccatct
ccagaagctgatgctccagtgctgggcagtcccgagaaggaagaggcggcctcagaggta
ccagccgctgctcccgacactgcaccaccggcccctgacaggcctgttgagaagaaatcc
tactcccgggcaagaagaaccagaatcaaagctggagatgcagtcaaggttgcagaggac
gtgccccctccacctgaagggttgaacccggcacctcaagtcccagaaacgacccctcct
ccacctgctaagactggaagctgggaggctccagtggattctactacaagtggacttgag
caagatgtggcacaactaaatataaccgaacagaactggagtccagggcagccttcattc
ctgcagccacgtgagcttcggggtatgcccaaccacatacacatgggagcaggacctcca
cctcagtttaaccggatggaagaaatgggtgtccagggtgggcgagccaaacgctattca
tctcagcggcaaagacccgtgccagagccccctgcccctcctgtgcacatcagtatcatg
gaaggacattactatgatccactgcagttccagggaccaatctatacccatggtgacaac
cctgccccactgcctcctcagggcatgattgtgcagccagaaatgcaccttccccaccca
ggtttacatccccaccagacaccggcacctctgcccaatccgggtctctatgccccacca
gtgtccatgtctccgggacagccgccaccgcagcagctgcttgctcctgcttacttttct
gccccaggcgtcatgaactttggtaaccccagttacccttatgctccaggggcactgcct
cccccaccgcctcctcatctgtatcctaatacacaggccccatcacaggtatatggagga
gtgacctactataaccccgcccagcagcaggtgcagccaaagccctccccaccccggagg
actcctcagccagtcaccatcaaacccccaccacctgaggttgtaagcaggggttccagt
taa |