| Entry |
|
|---|
| Symbol |
SMARCA2
|
|---|
| Name |
(RefSeq) probable global transcription activator SNF2L2
|
|---|
| KO |
| K11647 | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-] |
|
|---|
| Organism |
umr Ursus maritimus (polar bear)
|
|---|
| Pathway |
| umr03082 | ATP-dependent chromatin remodeling |
|
|---|
| Brite |
KEGG Orthology (KO) [BR:umr00001]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103663331 (SMARCA2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
103663331 (SMARCA2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
103663331 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:umr03021]
103663331 (SMARCA2)
03036 Chromosome and associated proteins [BR:umr03036]
103663331 (SMARCA2)
Transcription machinery [BR:umr03021]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103663331 (SMARCA2)
Chromosome and associated proteins [BR:umr03036]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
103663331 (SMARCA2)
Chromatin remodeling factors
BAF complex
103663331 (SMARCA2)
PBAF complex
103663331 (SMARCA2)
GBAF(ncBAF) complex
103663331 (SMARCA2)
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
Unknown
|
|---|
| AA seq |
1567 aa
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPTM
GSADFPQESTHQMHKPIDGLHDKGIVEDMHCGSMKGSGMRPPHPGMGPPQSPMDQHSQGY
MSPHPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGPLISGDPQAMSQPSRGPSPFSPVQLH
QLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGMQQPQHQPPQPQPQAQQPQQQALVNY
NRPSGRFLCNPVNNAMVQLGVVPVAGAAGRPGGWLQGAXPGPSVPQPAPGQPSPILQLQQ
KQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLPGSLPPDLRTKATVELKAL
RLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQERK
RRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKERM
RRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRRRRK
KKAEEIAEGGESALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQLDAWLEM
NPGYEVAPRSDSEESDSDYEEEDEEEESSRQDTEEKILLDPNSEEVSEKDAKQIIETAKQ
DVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNL
NGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKIS
YKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKL
TQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGER
VDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQA
KGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGA
ELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSE
DRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRI
GQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEH
EEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSW
IIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAIEDGNLEEMEEEVRL
KKRKRRRNVDKDPAKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDRCNV
EKVPGNSQVEIEGNSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRS
LGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDDSNEEEEEE
EEEESESEAKSVKVKIKLNKKDEKGRDKGKGKKRPNRGKAKPVVSDFDSDEEQDENEQSE
ASGTDDE |
|---|
| NT seq |
4704 nt +upstreamnt +downstreamnt
atgtccacgcccacagaccctggcgcgatgccccatccagggccttcgccggggccggga
ccctcgcctggacccattcttggacctagtccaggacccggaccatccccgggttctgtg
cacagtatgatggggccgagccctggaccgcccagcgtctcacaccctatgccgacaatg
gggtctgccgacttcccacaggaaagcacgcaccaaatgcataagcccatcgatggtctg
catgacaaggggattgtagaagacatgcactgtggatccatgaagggctccggcatgcgg
ccccctcacccggggatgggtcctccccagagtccgatggatcaacacagccaaggttac
atgtcgccacacccgtctccgttgggagccccagagcacgtctccagcccgatgtcggga
ggcggcccgaccccaccccagatgccgccgagccagccggggcccctcatctcgggcgat
ccgcaggcgatgagccagcccagcagaggtccctcgcctttcagccctgtccagctgcat
cagctgcgagcgcagattttagcttacaaaatgctggcccggggccagcccctccccgaa
acgctgcagcttgcagtccaggggaaaaggacgttgcccggcatgcagcagccccagcac
cagcccccgcagccccagccccaggcgcagcagccgcagcagcaggccctagttaactac
aaccgaccatctggtaggttcctgtgtaacccagtgaataatgcgatggtccaactcggc
gtggtccccgtggcgggggcagcgggcaggccgggggggtggctgcagggcgccgngccc
gggccctccgtgccgcagccggccccggggcagccctcgcccatcctgcagctccagcag
aagcagagccgcatcagccccatccagaaaccgcaaggcctggacccggtggagatcctg
caggagcgcgagtacaggctccaggctcgcatagctcataggatacaagaactggaaaat
ctgcctggctctttgccaccagatttacgaaccaaagcgaccgtggaactgaaagcgctt
cggctactcaatttccagcgtcagctgagacaggaggtggtggcctgcatgcgacgggac
acgaccctggagacagccctcaactccaaagcctacaaacggagcaagcggcagaccctg
cgggaggcccgcatgacggagaaactggagaagcagcagaagatcgagcaggagaggaag
cgccggcagaagcaccaggaatacctgaacagcattttgcagcatgcgaaagattttaaa
gagtaccatcggtctgtggccggcaagatccagaagttgtccaaagcagtggcaacctgg
cacgccaacactgaaagagagcagaagaaagagacggagcggatcgaaaaggagagaatg
cggagactgatggccgaagatgaagagggctatagaaaactgatcgatcaaaagaaagac
aggcgtttagcttacctcctgcagcagaccgatgagtatgtggccaacctgaccaacctg
gtgtgggagcacaagcaagcccaagcagccaaagagaagaagaagaggaggaggaggaag
aagaaggctgaagagatcgccgagggaggagagtctgccctgggaccggatggagagccc
atcgatgaaagcagtcagatgagtgacctgcccgtcaaagtgactcacacagaaactggc
aaggtcctctttggaccagaagcacccaaagcaagtcagctggacgcctggttggaaatg
aatcccggttacgaggttgccccccgatccgacagtgaagagagcgattctgattacgag
gaggaggatgaggaagaagagtccagtcggcaggacacggaagagaaaatacttctggat
ccaaacagtgaagaggtctccgagaaggacgccaagcagattattgagacggccaagcag
gacgtagacgatgagtacagcatgcagtacagtgccaggggctcgcagtcctactacacg
gtggcccatgccatctctgagcgggtggagaagcagtctgccctcctcattaatgggacc
ctgaagcattatcagctccagggcctggaatggatggtttccctgtataataacaatttg
aacgggatcttagctgatgaaatggggctagggaagaccatacaaaccattgcactcatc
acttatctgatggagcacaaaagactcaatggcccctatctcatcattgttcccctttcg
actctgtctaactggacatatgaatttgacaaatgggctccttctgtggtgaaaatttct
tacaagggcacccctgccatgcgtcgctcccttgtcccccagctgcggagtggcaaattc
aacgtcctcctgactacttacgagtacattatcaaagacaagcacattcttgcaaagatt
cggtggaaatacatgattgtggatgaaggccaccgaatgaagaatcaccactgcaagctg
actcaggtcttgaacactcactatgtggcccccagaaggatcctcttgactgggaccccg
ctgcagaataagctcccggaactctgggccctccttaacttcctcctccccaccattttt
aagagctgcagcacatttgaacagtggtttaacgctccatttgccatgaccggagaaagg
gtggacttaaatgaagaggaaactatattgatcatcaggcgtctacataaggtgttgaga
ccatttttactgaggaggctgaagaaggaagtcgagtcccagctgccagaaaaggttgaa
tatgtgatcaagtgtgacatgtccgcgctgcagaaaattctctaccgccacatgcaagcc
aaagggatcctcctcacggacggctcggagaaagataagaaggggaagggaggcgccaag
actctcatgaacaccatcatgcaattgagaaaaatctgcaatcacccctatatgtttcag
cacatcgaggaatcctttgccgaacacctgggctattcaaatggggtcatcaatggggct
gagctgtatcgggcctcaggaaagtttgagctgcttgatcgtattctgccaaaactgaga
gcgactaatcaccgcgtgctgcttttctgccagatgacgtccctcatgaccatcatggaa
gattactttgcttttcggaacttcctgtaccttcgccttgatggcaccaccaagtctgag
gaccgcgctgctctgctgaagaaattcaacgagcccgggtcccagtacttcatcttcctg
ctgagcacgagagctggcggcctgggcttgaaccttcaggcagctgataccgtggtcatc
tttgacagcgactggaatcctcaccaggatctgcaagcacaggaccgagctcaccgcatc
ggccagcagaacgaggtccgggtgctgaggctgtgcacggtgaacagcgtggaggaaaag
attctcgccgcggcgaagtacaagctgaacgtggatcagaaagtgatccaggccggcatg
tttgatcagaagtcttcaagccacgagcggagggcgttcctgcaggccatcctggagcac
gaagaggaaaatgaggaagaagatgaggtgcccgacgacgagactctgaaccaaatgatt
gctcgacgagaagaggaatttgatctcttcatgcgtatggacatggaccggcggagggag
gatgcccggaacccgaagcgtaagccccgcttaatggaggaagatgagctgccctcctgg
attattaaggatgacgccgaagtagaacggctcacgtgtgaagaagaggaggagaaaata
tttggtagggggtctcgccagcgccgggacgtggactacagcgacgccctcacggagaag
cagtggctgagggccattgaagacggcaatttggaagaaatggaagaggaagtacggctc
aagaagcgaaaaagacgaagaaatgtggataaagatcctgcaaaggaagacgtggagaag
gccaagaagagaagaggccgccctccggctgagaaactctccccaaatccccccaaactg
acgaagcagatgaacgccatcatcgatactgtgataaactacaaagacaggtgtaacgtg
gagaaggtgcccggtaattctcaggtggaaatagaaggaaacagttcagggcggcagctc
agtgaagtcttcattcagttaccttcaaggaaagaattgccagaatattatgaattaatt
aggaagccggtggatttcaaaaaaataaaggaaaggattcgtaatcacaagtaccggagc
ctgggtgacctggagaaagatgtcatgcttctctgtcacaatgctcagacgttcaacttg
gagggatcccagatctacgaagactcgatcgtcttgcagtccgtgtttaagagtgcccgg
cagaaaatcgccaaagaggaagagagtgaggacgacagtaatgaagaggaggaggaggaa
gaggaggaggagtccgagtcggaggcaaaatctgttaaggtgaaaatcaagctcaataaa
aaagacgagaagggccgggacaaaggcaaaggcaagaaaaggccgaatcggggaaaagcc
aagcctgtagtgagtgatttcgacagcgatgaggaacaggatgaaaatgaacagtcagaa
gcaagtgggactgatgatgagtga |
|---|
