Ursus maritimus (polar bear): 103663834
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Entry
103663834 CDS
T03271
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50 isoform X1
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
umr
Ursus maritimus (polar bear)
Pathway
umr03440
Homologous recombination
umr03450
Non-homologous end-joining
umr04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
umr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103663834 (RAD50)
03450 Non-homologous end-joining
103663834 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
103663834 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
umr03032
]
103663834 (RAD50)
03400 DNA repair and recombination proteins [BR:
umr03400
]
103663834 (RAD50)
DNA replication proteins [BR:
umr03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
103663834 (RAD50)
DNA repair and recombination proteins [BR:
umr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
103663834 (RAD50)
BRCA1-C complex
103663834 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
103663834 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
SbcC_Walker_B
SMC_N
AAA_15
DUF2703
AAA_29
Motif
Other DBs
NCBI-GeneID:
103663834
NCBI-ProteinID:
XP_008689857
UniProt:
A0A384C4U6
LinkDB
All DBs
Position
Unknown
AA seq
1312 aa
AA seq
DB search
MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG
TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELTAVQRSMVCTQKSKKTEFKTLEGVITR
TKHGEKVSLSSKCAEIDREMISSLGVSKSVLNNVIFCHQEESNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQITNKEAQLTSSKEI
VKSYENELDPLKNRLKEIEQNLSKIMRLDNEIKALDSRKKQMEKDNSELEQKMEKVFQGT
DEQLNDLYHNHQRTVREKERRLVDCQREVEKLNKESRLLNQEKSELLVEQGRLQLQADRH
QEHIRARDSLIQSLATQLELDGFERGPFSERHIKNFHKLVRERQEREAEIASQLMNDFAE
KETLKQKQIDEIRDKKIGLGRIIELKSEIQSKKQNELRNVKYELQQLEGSSDRILELDQE
LSKAERELSKAEKNSNVEALKAEVISLQNEKADLDRTLRKLDQEMEQLNHHTTTRTQMEM
LTKDKADKDEQIRKIKSRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKE
LASAEQNKNHINNELKRKEEQLSSYEDKLFDVCGSQDFENDFDRLKEEIEKSSKQRAMLA
GATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELK
KKEKRRDEMLGLVPVRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMP
EEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGLDLDRTVQQVNQEKQEKQHKLD
TVSSKMELNRKLIQDQQEQIQHLKSTTNELKSEKLQISTNLQRRQQLEEQTVELSTEVQS
LFREIKDAKEQLSPLETTLEKFQQEKEELINKKNKSNKIAQDKINDIKEKVKNIHGYMKD
IENYIQDGKDDYKKQKETELNKVMAQLSECEKQKENINTEMGIMRQDIDTQKIQERWLQD
NLTLRKRNEELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEEKIDNIKRNHSLAIGRQNG
YEEEIIHFKRELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKM
EEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLLVITHDEDFVELLGRSEYVEKFYRIKKNIDQCSEIVKCSVSSLGSYVH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggatcgaaaagatgagcattttgggcgtgcggagctttggaatagaggacaaa
gataagcaaattatcacttttttcagcccccttacaattttggttggacctaatggggcg
gggaagacgaccatcattgaatgtctgaaatatatttgtactggagattttcctcctgga
accaaaggaaatacatttgttcatgatcccaaggttgctcaagaaacagatgttagagcc
cagatccgcctgcagtttcgtgatgtcaatggagaacttacagctgtacagagatctatg
gtgtgtactcagaaaagcaaaaagacagaatttaaaaccctggaaggagtcattactaga
acaaagcatggtgagaaggtcagtctcagctctaagtgtgcagaaattgaccgagagatg
ataagttctcttggggtttccaagtctgtgctgaataatgtcattttttgtcaccaagaa
gagtcgaattggcctttaagtgaaggaaaggctctgaagcaaaaatttgatgagattttt
tcagcaacaaggtacattaaagccttggaaacacttcggcaggtacgtcagacacaaggt
cagaaagtaaaagaatgtcaaacggaactaaaatatttgaagcaaaataaggaaaaagct
tgtgagatacgtgaccagattactaataaggaagcccagttaacatcatcaaaggaaatt
gtcaaatcctatgagaacgaacttgatccattgaagaatcgtctaaaagaaattgaacaa
aatctctctaaaataatgagactcgacaatgaaattaaagccttagatagccggaagaag
caaatggagaaagataatagtgaactggaacagaaaatggaaaaggtttttcaagggact
gatgagcaactaaatgatttatatcacaatcaccagagaacagtaagggagaaagaaagg
agactggtagactgtcaacgtgaagtggaaaagttaaataaagaatcacggcttctcaat
caggaaaaatcagaactgcttgttgagcagggtcgtctgcaactacaagcagatcgccat
caagaacatatccgagctagagattcattaattcagtctttggcaacacagctagaattg
gatggctttgagcgtggaccattcagtgaaagacatattaaaaattttcacaaacttgtg
agagagaggcaagaaagggaagcagaaattgccagccaactgatgaatgactttgcagaa
aaagagactctgaaacaaaaacagatagatgagataagagataagaaaattggactggga
agaataattgagctaaaatcagaaatccaaagtaagaagcagaatgagctgagaaatgtg
aagtatgaattacagcagttggaaggatcttcagaccggattcttgaactggaccaggag
ctctcaaaagctgaacgtgagctgagcaaggctgagaagaacagcaatgtagaagctcta
aaagcagaagtaataagccttcaaaatgagaaggcagacctagacaggaccctgcgtaaa
ttggaccaggagatggaacagttaaaccatcatacaacaacacgcacccagatggagatg
ctgaccaaagacaaagccgacaaagatgaacaaatcagaaaaataaaatctagacacagt
gatgaattaacttcattgttaggatattttcccaacaaaaaacagctcgaagactggctt
catagtaaatcaaaagaaattaatcagaccagggacagacttgccaaattgaacaaagaa
ctagcttcagctgagcaaaataaaaatcatataaataatgaactaaaaaggaaagaagag
cagttgtccagttatgaagacaagctgtttgatgtttgtggtagccaggattttgaaaat
gacttcgacaggcttaaagaagaaattgaaaaatcctcaaaacagcgagccatgctggct
ggagccacagcagtttactcccaattcattactcagctaacagatgaaaaccagtcatgt
tgccctgtctgtcagagggtttttcagacagaagctgaattacaggaagtcatcagtgat
ttgcagtctaagctgcggcttgctccagataaactgaaatcaacagaatcagaactaaag
aaaaaagaaaagcggcgtgacgaaatgctgggacttgtccctgtgaggcaaagcataatt
gatttgaaggagaaggaaataccagaattaagaaacaaactgcagaatgtcaatagagac
atacagcgcttaaagaatgacatagaggaacaggaaacgctcttgggcaccataatgcct
gaagaagaaagtgctaaagtctgcctgacagatgttacaattatggagaggttccagatg
gaactcaaagatgttgaaagaaaaattgcacagcaagcagctaagctgcaaggactagac
ttggatagaactgttcaacaagtaaaccaggaaaaacaagagaaacaacacaaattagat
acagtttccagtaagatggaattgaatcgcaagcttatacaggaccagcaggaacagatt
caacacctaaaaagtacaacaaatgaacttaaatcagagaaacttcagatatctactaat
ttacaacgtcgtcagcaactagaggagcagactgtggaattatccactgaagttcagtcc
ttattcagagagataaaggatgctaaagagcagttaagccccttggaaacaacattggaa
aagttccagcaggaaaaagaagaattaatcaacaagaaaaataaaagcaacaaaatagcc
caggataaaatcaatgatatcaaagaaaaggttaaaaatattcatggttatatgaaagac
attgagaattatattcaagatggaaaagatgactataagaagcaaaaagaaactgagctt
aataaagtaatggctcaactaagtgaatgtgagaaacagaaagaaaatataaatacagaa
atgggaatcatgagacaagatattgatacacagaagatacaagagagatggctacaggat
aaccttactttaagaaaaagaaatgaggaactaaaagaagttgaagaagaaagaaaacag
catttgaaggaaatgggtcaaatgcaggttttacaaatgaagaatgaacatcagaagttg
gaagaaaaaatagacaatataaaaagaaatcacagcttggcaatagggcgacagaacggt
tatgaggaagaaattattcattttaagagagaacttcgagaacctcagtttcgggatgca
gaggaaaagtacagagaaatgatgattgtgatgagaacaacagagcttgtgaacaaggat
ctggacatttattataagacccttgatcaagcaatcatgaaatttcacagtatgaaaatg
gaagaaatcaacaaaattattcgtgacctttggcgaagtacctatcgtggacaagatatt
gaatacatagaaattcggtctgatgccgatgaaaatgtatcagcctctgataaaaggcgg
aattataactaccgcgtggtgatgctaaagggagacacagccttggacatgcgagggcga
tgcagtgctggacaaaaggtcctagcctccctcatcattcgcctggccttggccgagacg
ttctgcttgaactgtggcatccttgccttggatgagccaaccacgaatcttgaccgagaa
aacatcgagtctcttgcacacgctctcgttgagataatcaagagtcgctcacagcagcgt
aacttccagcttctggtcatcacgcacgatgaagattttgtggagctcttaggccgttct
gaatatgtggagaaattctacaggattaagaagaacattgatcagtgctcagagattgtg
aaatgtagtgttagctccctgggttcttatgttcattaa
DBGET
integrated database retrieval system
