Ursus maritimus (polar bear): 103665633
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Entry
103665633 CDS
T03271
Symbol
DDX42
Name
(RefSeq) ATP-dependent RNA helicase DDX42 isoform X1
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
umr
Ursus maritimus (polar bear)
Pathway
umr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
umr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103665633 (DDX42)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
umr03041
]
103665633 (DDX42)
Enzymes [BR:
umr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103665633 (DDX42)
Spliceosome [BR:
umr03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
103665633 (DDX42)
Complex B
103665633 (DDX42)
Complex C
U2 SnRNP specific factors
103665633 (DDX42)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
103665633
NCBI-ProteinID:
XP_040496340
UniProt:
A0A8M1GMT6
LinkDB
All DBs
Position
Unknown
AA seq
931 aa
AA seq
DB search
MNWNKGGPGTKRGFGFGGFAISAGKKEEPKLPQQSHSAFGATSSSSGFGKSAPPQLPSFY
KIGSKRANFDEENAYFEDEEEDSSNVDLPYIPAENSPTRQQFHSKLADSDSDDDPLEAFM
AEVEDQAARDMKRLEEKDKERKNVKGIRDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDN
LEYDSDGNPIAPSKKIIDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLN
LRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTG
SGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAV
YGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQ
VRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHS
GPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKV
ISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYT
LLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGY
RERPGLGSENTDRGNNNNVMSNYEAYKPSTGAMGDRLTAMKAAFQSQYKSHFVAASLSNQ
KAGSSAAGASGWTSAGSLNSVPTSSAQQGHSSPDSPIASATKGIPSFGNTGNLSSAPVTY
PSAGAQGVNNTASGSNSREGPGGGNGKRERYTENRGGSRHGHGESSSRHGDSPRHGDGGR
HGDGYRYPESSGSRHADSHRHGENRHGGSGSRHGESRGANDGRNGESRKEGCNRESKVDS
KMDKVDSKTDKTADGFAVPEPPKRKKSRWDS
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgaactggaataaaggtggccctggcaccaagaggggatttggctttggaggttttgct
attagtgctggaaagaaggaggaacccaaactcccacaacagtcccacagtgcctttggg
gcaaccagctcttcttccggatttggaaaatccgctccaccacagctcccttctttctac
aaaattggatccaaacgggccaactttgatgaagaaaatgcgtattttgaagatgaagaa
gaagactcaagcaatgttgatttaccttacattcctgctgaaaattcacctacccgccag
cagttccattccaagctggcagattctgacagcgatgatgatcccttggaggcattcatg
gccgaagtggaggatcaggcggctagagacatgaagaggcttgaagaaaaggacaaggaa
agaaaaaacgtaaagggtattcgagatgacattgaagaggaagatgaccaagaagcttat
tttcggtacatggcagagaacccaactgctggtgtggttcaagaggaagaagaagataat
ttggaatatgatagtgatggaaatccaattgcaccttccaaaaaaatcattgatcctctt
cctcccattgatcattcagagattgactatccaccatttgaaaaaaatttttacaacgaa
catgaagagataaccaacctcacccctcagcagctaatagatctccgtcataagctcaat
cttcgggtctctggtgctgcacctcctagaccgggaagtagttttgctcattttgggttt
gatgaacaacttatgcaccagattcggaagtctgagtacacacagcccactccaatacag
tgccagggtgtgcctgtggcattaagtggtagagacatgattggtattgccaaaacaggc
agtggaaaaactgcagcctttatctggcccatgttgattcatataatggaccagaaggaa
ttggaaccaggtgatggaccaattgcagtgatcgtgtgtcctaccagggagctttgccag
cagatccatgcagaatgtaagcggtttgggaaagcatataatcttcgatcagtcgccgtg
tatggaggaggaagcatgtgggagcaggccaaggcccttcaggagggggcagagattgtt
gtgtgtaccccaggtcgactaattgatcatgtgaagaagaaagctaccaatcttcaaaga
gtctcttacctcgtgtttgatgaagcagatcgcatgtttgacatgggatttgagtaccag
gtgcgatccatagcaagtcatgtccgtcctgacagacagactcttttattcagtgcaact
tttcggaaaaagattgaaaaactggccagagacatcctgatcgacccgatccgtgtggtg
cagggagacattggagaggcaaatgaggatgtgacacagattgtggaaattctccattct
gggcctagtaaatggaactggcttacccggcgtctggtggaatttacctcttcaggaagt
gtcctcctgttcgttactaaaaaagccaatgctgaagagctagccaataaccttaagcag
gagggtcataatcttgggctgcttcatggggatatggatcagagtgaaagaaacaaggtc
atttcagactttaagaaaaaggacatcccagtcctggtggccacagatgttgcagctcgt
ggtctggacattccttcaattaagaccgtcattaactatgatgtggcacgagacattgat
actcatactcacaggattggccgcacaggacgagcgggtgagaaaggcgtggcctatacc
ttactgacccccaaggacagcaattttgctggtgaccttgtccggaacttggaaggagcc
aatcagcatgtttccaaggaactcctagatctggcgatgcagaatgcctggtttcggaaa
tcccgctttaaaggaggaaaaggcaaaaagctgaacattggcggaggcggcctaggctac
agggagcggcccggcctcggctcggagaacacggaccgaggaaacaacaacaacgtgatg
agcaattatgaggcctacaagccctccacgggagccatgggagatcggctgacggcaatg
aaagcagctttccagtcacagtacaagagtcactttgttgctgccagcctaagcaaccag
aaggcgggaagctctgctgctggggcaagtggatggactagtgcagggagcttgaattcc
gttccaaccagttcagcccaacagggccacagcagtccagacagccccattgccagtgcc
accaagggcatcccaagctttggcaatactgggaacctcagcagtgctccagtgacctac
ccttctgctggagcgcagggagtcaacaatacagcttcagggagtaacagccgagaaggg
cctgggggaggcaatgggaagagagagagatacacagagaaccggggcggcagccgtcat
ggtcacggagagagtagcagtcggcatggtgacagtccacgtcatggagatggtggtcgc
catggagatggataccgctacccagaaagcagcggcagccgtcatgctgatagtcaccgt
catggggagaataggcacggaggaagtggcagccgacatggagagagccgaggtgcaaat
gatggtcggaatggtgaaagcaggaaagaaggttgtaatcgtgagagcaaagtggacagc
aagatggacaaggtggacagcaagacagataagacagctgatggtttcgctgtccccgag
ccacccaagcgcaagaagagtcgatgggacagttaa
DBGET
integrated database retrieval system
