KEGG   Ursus maritimus (polar bear): 103666001
Entry
103666001         CDS       T03271                                 
Symbol
ALYREF
Name
(RefSeq) THO complex subunit 4
  KO
K12881  THO complex subunit 4
Organism
umr  Ursus maritimus (polar bear)
Pathway
umr03013  Nucleocytoplasmic transport
umr03015  mRNA surveillance pathway
umr03040  Spliceosome
umr05014  Amyotrophic lateral sclerosis
umr05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:umr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103666001 (ALYREF)
  09122 Translation
   03013 Nucleocytoplasmic transport
    103666001 (ALYREF)
   03015 mRNA surveillance pathway
    103666001 (ALYREF)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    103666001 (ALYREF)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    103666001 (ALYREF)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:umr03019]
    103666001 (ALYREF)
   03041 Spliceosome [BR:umr03041]
    103666001 (ALYREF)
Messenger RNA biogenesis [BR:umr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     103666001 (ALYREF)
    TREX complex
     103666001 (ALYREF)
Spliceosome [BR:umr03041]
 Complex C
  Other components
   EJC/TREX
    103666001 (ALYREF)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    103666001 (ALYREF)
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_occluded
Other DBs
NCBI-GeneID: 103666001
NCBI-ProteinID: XP_040495938
UniProt: A0A8M1GJS3
LinkDB
Position
Unknown
AA seq 256 aa
MADKMDMSLDDIIKLNRSQRGGRGGGRGRGRAGSQGGRGSGAQAAARVNRGGGPIRNRPA
IARGAAGGGGRNRPAPYSRPKQLPDKWQHDLFDSGFGGGAGVETGGKLLVSNLDFGVSDA
DIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL
VTSQIDTQRRPAQSVNRGGMARSRGSGGFGGGGTRRGARGGSRGRGRGTGRSSKQQLSAE
ELDAQLDAYNARMDTS
NT seq 771 nt   +upstreamnt  +downstreamnt
atggccgacaaaatggacatgtctctggacgacatcattaagctgaaccggagccagcga
ggcggccgcggcggaggccggggccgcggcagggccggctcccagggcggccgtggcagc
ggagcgcaggccgccgcgcgagtgaaccgaggcggcgggcccatccggaaccggccggcc
atcgcccgcggcgcggcgggcggcggcggcaggaaccggccggcgccctacagccggccg
aaacaacttcctgacaagtggcaacatgaccttttcgacagtggatttgggggtggcgca
ggcgtcgagactggtgggaaactgctggtgtcaaatctggattttggagtgtccgacgct
gatattcaggagctctttgctgaattcggaactctgaagaaggcggctgtgcactacgac
cgctccgggcgcagtttagggacagctgacgtgcactttgaacggaaggcagacgccctg
aaagctatgaaacagtacaacggggtccctctggatggccgtcccatgaacatccagctc
gtcacgtcacagattgacacgcagcggagacctgcgcagagtgtaaacagaggcgggatg
gctagaagccgtggctccggaggttttggcggtggtggcactcggagaggcgctcgcgga
ggaagccggggccgaggcagaggcactggcaggagttcaaagcagcagctttctgcagag
gagctggatgcccagctggacgcttataacgcgagaatggacaccagttaa

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