Ursus maritimus (polar bear): 103666351
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Entry
103666351 CDS
T03271
Symbol
PABPC4
Name
(RefSeq) polyadenylate-binding protein 4 isoform X1
KO
K13126
polyadenylate-binding protein
Organism
umr
Ursus maritimus (polar bear)
Pathway
umr03015
mRNA surveillance pathway
umr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
umr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103666351 (PABPC4)
09123 Folding, sorting and degradation
03018 RNA degradation
103666351 (PABPC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
umr03019
]
103666351 (PABPC4)
03041 Spliceosome [BR:
umr03041
]
103666351 (PABPC4)
Messenger RNA biogenesis [BR:
umr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
103666351 (PABPC4)
mRNA cycle factors
Stress granule specific factors
103666351 (PABPC4)
Spliceosome [BR:
umr03041
]
Complex C
Other components
Complex C specific factors
103666351 (PABPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RRM_7
RRM_occluded
RRM_10
RBD_RDR6
RRM_3
POP1_C
ApbA_C
Motif
Other DBs
NCBI-GeneID:
103666351
NCBI-ProteinID:
XP_008692576
UniProt:
A0A384CCK0
A0A452V0W2
LinkDB
All DBs
Position
Unknown
AA seq
660 aa
AA seq
DB search
MNAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFS
AFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKERE
AELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEK
HEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN
LDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS
KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP
PYYTPNQLAQMRPNPRWQQGGRPQGFQGMPSAIRQSGPRPALRHLAPTGNAPASRGLPTT
AQRVGSECPDRLAMDFGGAGAAQQGLTDGCQSGGVPTAVQTLAPRAAVAAAAPRAVAPYK
YASSVRSPHPAIQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHS
NLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVAAATS
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctgcggccagcagctaccccatggcctccctctacgtgggtgacctgcactcg
gacgtcaccgaggccatgctgtatgaaaagttcagtcctgcggggcctgtgctgtccatc
cgggtctgccgcgatatgatcacccgccgctccctgggttatgcctacgtcaacttccag
cagccggctgacgctgagcgggccttggataccatgaactttgatgtgattaagggaaag
ccaatccgtatcatgtggtctcagagggatccctctttgagaaaatctggtgtgggaaat
gtcttcatcaagaatctggacaaatctatagataacaaggcactttatgatactttttct
gcttttggaaacattctgtcttgcaaggtggtgtgtgatgagaacggctctaagggttat
gcctttgtccacttcgagacgcaagaggctgctgacaaggccatcgagaagatgaacggc
atgctcctcaatgaccgcaaagtgtttgtgggcagattcaagtctcgaaaagagcgggaa
gctgagcttggagccaaagccaaggagttcactaatgtctatatcaaaaacttcggggaa
gaggtggatgatgagagcctgaaagagctgtttagccagtttggtaagaccctaagtgtc
aaggtgatgagagatcccagtgggaaatccaaaggctttggctttgtgagttacgagaaa
cacgaggatgccaataaggccgtggaagagatgaatggaaaagaaatcagtgggaaagtg
atttttgtaggccgtgcacagaagaaagtggaacggcaggctgagttaaagcggaaattt
gaacagctgaaacaagagagaattagtcggtatcagggggtgaatctgtacattaagaac
ttggatgacaccattgatgatgagaagttaaggaaagagttttctccttttggctcaatc
accagtgctaaggtaatgttggaggatgggagaagcaaagggtttggctttgtctgcttc
tcatctcctgaagaggcgaccaaagcagtcactgagatgaatggacgcatcgtgggctcc
aaaccactctatgtcgccctggcccagaggaaggaggagagaaaggctcacctgaccaac
cagtatatgcagcgggtggccggaatgcgagcgctgcctgccaacgccatcttaaatcag
ttccagcctgcagctggaggttactttgtgccagcggttccgcaggctcagggaagacct
ccatattacacacccaaccagttagcacagatgaggcctaacccccgctggcagcaaggt
gggagacctcaaggcttccaaggaatgccgagtgctatacgccagtctgggcctcgtccc
gctcttcgccatctggctccaactggtaatgctccggcctctcgcggcctccctactacc
gctcagagagtcgggtctgagtgcccggaccgcttggctatggactttggtggggctggc
gccgcccagcaagggctgactgacggctgccagtctggaggtgttcccacagctgtgcag
accttagcgcctcgtgccgctgtcgctgccgctgcccctcgggctgtcgcaccttacaaa
tacgcctccagtgtccgcagccctcaccctgccatccagcctctgcaggcaccgcagcct
gccgtccacgtgcaggggcaggagcccctgaccgcctccatgctggctgcagcgcctccc
caggagcagaagcagatgctgggagaacgtttgttcccactcatccaaaccatgcattca
aacctggcggggaaaatcacgggcatgctgctggagattgacaactctgagctgctgcac
atgctggagtcccccgagtctctccgctccaaggtggacgaagctgtggcggttctgcag
gctcatcacgccaagaaagaagccgcccagaaggtgggcgctgttgctgctgctacctct
tag
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