Ursus maritimus (polar bear): 103668294
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Entry
103668294 CDS
T03271
Symbol
RC3H1
Name
(RefSeq) roquin-1 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
umr
Ursus maritimus (polar bear)
Brite
KEGG Orthology (KO) [BR:
umr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
umr03000
]
103668294 (RC3H1)
04121 Ubiquitin system [BR:
umr04121
]
103668294 (RC3H1)
Transcription factors [BR:
umr03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
103668294 (RC3H1)
Ubiquitin system [BR:
umr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103668294 (RC3H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
Prok-RING_4
zf-CCCH
zf-C3HC4_3
zf-C3HC4
zf-CCCH_UNK
zf-C3HC4_2
FYVE
zf_CCCH_4
zf-CCCH_4
Vesi_VP2
PaaA_PaaC
Baculo_IE-1
zf-RING_4
zf-RING_6
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
103668294
NCBI-ProteinID:
XP_040492160
UniProt:
A0A384CIS0
LinkDB
All DBs
Position
Unknown
AA seq
1133 aa
AA seq
DB search
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IELLPVNSALLQLVGAQVPEQQPITLCSGVEDTKHYEEAKKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGADQQQPPQHSKYKTYMCR
DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSASVLPDE
GAVDLPSRKTPALPNGIVSAGNTVTQLIPRGTDATYDSSLKPGKIDHLSSSAPGSPPDLL
ESVPKSISALPVNPHPVPPRGPTDLPPMPVTKPLQMVPRGSQLYPAQQTDVYYQDPRGAA
PPFEPAPYQQGMYYTTPPQCVSRFVRPPPSAPEPGPPYLDHYPPYLQDRVVNSQYGTQPQ
QYPPMYPPHYDGRRVYPAQSYAREEIFRESPIPIEIPPAAVPSYVPDSRERYQQMEGYYP
VAPHPAQIRPSYMRDPPYSRLPPPAQPHPSLDELHRRRKEIMAQLEERKVISPPPFAPSP
TLPPTFHQEEFLDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDVVAAGSAEM
MNVESKGMRDQRLDLQRRAAETSDDDLIPFGDRPTVSRFGAISRTSKTIYQGAGPMQALA
PQGAPTKPINISDYSPYGTHGGWGGSPYSPHQNIPSQGHFSERERMSMSEVASHGKPLPS
AEREQLRLELQQLNHQISQQTQLRGLEAVSNRLVLQREVNTLAGQSQPPPPPPKWPGMIS
SEQLSLELHQVEREIGKRTRELSMENQCSLDMKSKLNTSKQAENGQPEPQNKVSAEDLTL
TFSSDVPNGSALTQENISLLSNKTGSLNLSEDPEGGGDNNDSQRAGVTPTSAP
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacaagctccacaatggacggatttcctctcctgcccgatttgcactcagact
ttcgatgaaacaattcgaaagcccatcagtttgggttgtggccatactgtctgcaagatg
tgcctgaataaactccaccgcaaggcttgcccatttgaccagaccactatcaatacagac
attgagctcctccccgtgaactcagcattgctgcagctagtgggtgctcaggtccctgag
cagcagcccattaccttgtgtagtggagttgaagatacaaagcattatgaggaagccaag
aaatgtgtcgaagaattagcattgtacctgaaaccactcagcagtgctagaggagtgggt
ctgaatagcactactcagagtgttctgagtcgcccaatgcagaggaagctggtgactctg
gtccactgccagctagtggaagaagaaggcaggattcgtgctatgagagcagctcgatct
ttaggtgaacgaacagttacagaactcattcttcagcaccagaatcctcagcaactctcc
tctaatctttgggcagcagtcagggctaggggttgccagttccttggaccagcaatgcag
gaggaagccctaaagctggttctcctggccttggaagatggttctgctttgtcaaggaaa
gtattggttctctttgtggtgcaaaggttggagccgcggtttcctcaggcctctaaaact
agcattgggcatgttgtccagctcctttatagagcttcctgcttcaaggtcaccaaacgt
gatgaggattcttctttgatgcagctaaaagaagaatttagaacctatgaagctctgcgg
cgagaacatgactcccagatagtgcaaattgctatggaagcaggcttacgaattgcacca
gaccaatggtcctctttgctttatggagaccagtctcacaagtctcatatgcagtcaatt
attgacaagttgcagaccccagcctcttttgcacaaagtgttcaggaactaacaattgct
ctccagcgaactggagatccagcaaatttgaaccgactaagaccccatttggagctattg
gcaaacattgaccctagtccagatgctcctcctcctacttgggagcagctagaaaacggg
ctggttgctgtgcggaccgtggtacatgggctagtagactatatccagaaccatagcaaa
aagggagcagatcaacagcagcctccacagcatagcaaatacaaaacatacatgtgtcga
gatatgaagcagagaggaggatgccctcgtggggccagctgtacgtttgcacactcacag
gaggaactggagaagtttcgtaaaatgaacaaacgcctagttcccagaagacccctgagt
gcctctttgggtcagcttaatgaggtgggcctgccttcagcatctgtccttccagatgaa
ggtgcagtggatctgcctagcagaaaaacccctgctctgccaaatggaattgtgtcagca
gggaatacagtaacacagctgattccacgagggacagacgccacctacgattctagtctg
aaaccgggaaagatagatcatctgagcagtagtgcccctggatctcctcctgacctgcta
gaatctgtccctaagagtatttctgccttacctgtgaatccacatcctgtacctccaagg
gggccgacagacttgcctcctatgccagtcaccaaaccactgcagatggtaccacgaggc
tctcagttatatccagcacaacagacagatgtttactatcaggatcctcgaggagctgct
ccaccatttgaaccagcaccttatcagcagggtatgtactatactacaccaccacagtgt
gtatctcgttttgtcagacctccaccatctgctcctgaacctggtcctccctacttggat
cattatccaccatatctccaagatcgtgtagtaaactctcagtatggcacacagccacaa
cagtacccacctatgtacccaccacactatgatggccgccgagtataccctgctcagtct
tacgcaagagaggagattttccgagaaagccctatacccattgagattccacctgcagca
gtaccatcctatgtaccagactccagagaaagataccagcagatggagggttactatccc
gtggctcctcatccagctcagatcagaccttcgtacatgagagaccctccttatagccgg
cttcctcctcctgctcagccccatcctagtctagatgagctccatcgcagacgaaaggaa
ataatggcccagctagaggaaaggaaggttatctctccacctccttttgcaccttcccca
acattgcctcctacctttcatcaagaggaatttttggatgaagacttgaaggtagctggg
aaatacaaaggaaatgattatagccaatattctccctggtcatgtgacaccatcggctcc
tacattggaaccaaagatgcaaaacccaaagatgtggtggcagcggggagtgcggaaatg
atgaatgtggagagtaaaggaatgagagatcagcgactggatcttcagagacgagcagca
gaaaccagtgatgatgaccttatcccattcggagaccgaccaaccgtatctcggtttggt
gccatctctcgaacctccaaaacaatatatcagggtgctggtcccatgcaggctctggca
cctcagggagctcccacaaaacctattaatatttcagattacagtccatatggaacccac
ggtggctggggaggttctccgtattcacctcatcaaaacataccttctcagggacacttc
agtgagagggagagaatgtccatgtcagaagtggccagtcatggaaaaccccttccatct
gctgagagggaacagctacgactagaattgcaacaactaaaccatcaaatcagccaacag
actcagctacgtggactagaggctgttagtaacaggctggtgttacagagggaggtgaac
accctggcaggccagtcacagcccccaccaccacctccaaaatggcctggaatgatttca
agtgagcagttgagcttggaactgcaccaggtggaaagggaaatcgggaagagaacccgg
gaactgagtatggagaatcagtgttctctggacatgaaaagcaaattgaatacaagtaag
caagctgaaaatggacaaccagaaccacagaataaggtttccgctgaggaccttacgttg
acattcagcagtgatgtaccaaatggctcagctttgacacaagagaatatcagccttctg
tcaaacaagaccggctctctgaacctgtcagaggaccctgagggaggaggtgacaacaat
gactcccagagagcaggagtcacacccacttctgctccctaa
DBGET
integrated database retrieval system
