KEGG   Ursus maritimus (polar bear): 103668509
Entry
103668509         CDS       T03271                                 
Symbol
THOC6
Name
(RefSeq) THO complex subunit 6 homolog isoform X1
  KO
K13175  THO complex subunit 6
Organism
umr  Ursus maritimus (polar bear)
Pathway
umr03013  Nucleocytoplasmic transport
umr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:umr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103668509 (THOC6)
  09122 Translation
   03013 Nucleocytoplasmic transport
    103668509 (THOC6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:umr03019]
    103668509 (THOC6)
   03041 Spliceosome [BR:umr03041]
    103668509 (THOC6)
Messenger RNA biogenesis [BR:umr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     103668509 (THOC6)
Spliceosome [BR:umr03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    103668509 (THOC6)
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_WDR5 WD40_Prp19 WDR55 Beta-prop_WDR36-Utp21_2nd WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_EML_2 WD40_Gbeta NBCH_WD40 Beta-prop_CAF1B_HIR1 WDR54 Beta-prop_IP5PC_F EIF3I Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 103668509
NCBI-ProteinID: XP_008694997
UniProt: A0A384CJJ6
LinkDB
Position
Unknown
AA seq 350 aa
MERAVPHAVPLGQVASCSLSPQMEVFQALQRLHMTIFSQSVSPCGKFLAAGNNYGQIAIF
SLSAALSSEAKEESKNPVVTFQAHDGPVYSMVSTDRHLLSAGDGEVKAWLWAEILKKGCK
ELWRRQPPYRTSLEVPEINALLLVPKENSLILAGGDCQLHTMDLETGAFTRALRGHTDYI
HCLALRERSPEVLSGGEDGAVRLWDLRTAKEVQTIEVYKHEECSRPHNGRWIGCLATDSD
WMVCGGGPALTLWHLRSSTPTTIFPMRAPQKHVTFYQDLILSAGQGRCVNQWQLSGELKA
QVPGSSPGLLSLSLNQQPAAPECKVLTAAGNSCRVDVFTNLGYRAFSLSF
NT seq 1053 nt   +upstreamnt  +downstreamnt
atggagcgagctgtgccacacgccgtacctctgggtcaggtagcttcatgcagcctctcc
ccacagatggaagtgtttcaggccctacagcggctccacatgaccattttctcccagagt
gtgtcaccctgcgggaagttcctggcagctgggaacaattacgggcagatagccatcttc
agcttgtctgctgctttgagctctgaggccaaagaagaaagtaagaatcctgtggtcaca
ttccaagcccatgatgggcccgtctacagcatggtctccactgatcgacatctgctcagt
gctggggatggggaggtgaaggcctggctttgggcagagatcctcaagaagggctgtaag
gagctgtggcggcgtcagcccccatacaggaccagcctagaagtgcctgagatcaatgct
ttgcttctcgtccctaaggagaattctctcatcctggcagggggagactgtcagttgcat
acgatggacctcgagactggggccttcacacgggccctccggggccacacagactatatc
cactgcctggcattgagggagcggagccccgaggtgctgtcgggtggggaggacggagct
gtgcgactttgggacctccggacagccaaggaagtccagaccatcgaggtgtataagcat
gaggagtgctcaagaccccacaatgggcgttggatcggatgtttagcaactgactcggac
tggatggtctgtggaggcggcccagcactcaccctctggcacctccgatcctccacaccc
accaccattttccccatgcgggcgccacagaaacacgtcaccttctaccaggacctgatt
ctgtccgctggccagggccgctgtgtcaaccagtggcagctgagtggggagctcaaggcc
caggtgcctggctcctccccagggctgcttagcctcagtctcaaccagcagccggcagca
cctgagtgcaaggtcctgacagccgcaggtaacagctgccgggtagatgtcttcaccaat
ctgggctaccgtgccttctccctgtccttctga

DBGET integrated database retrieval system